Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
HOXC6P09630 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HOXC6P09630 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
HOXC6P09630 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HOXC6P09630 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HOXC6P09630 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
HOXC6P09630 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.89■■□□□ 1.1
HOXC6P09630 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
HOXC6P09630 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
HOXC6P09630 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HOXC6P09630 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HOXC6P09630 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
HOXC6P09630 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.89■■□□□ 1.09
HOXC6P09630 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.89■■□□□ 1.09
HOXC6P09630 VENTXP5-201ENST00000523979 775 ntBASIC21.89■■□□□ 1.09
HOXC6P09630 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
HOXC6P09630 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.89■■□□□ 1.09
HOXC6P09630 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.89■■□□□ 1.09
HOXC6P09630 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
HOXC6P09630 AC083849.1-201ENST00000615227 514 ntBASIC21.89■■□□□ 1.09
HOXC6P09630 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.89■■□□□ 1.09
HOXC6P09630 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.89■■□□□ 1.09
HOXC6P09630 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.89■■□□□ 1.09
HOXC6P09630 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HOXC6P09630 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HOXC6P09630 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HOXC6P09630 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.88■■□□□ 1.09
HOXC6P09630 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.88■■□□□ 1.09
HOXC6P09630 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.88■■□□□ 1.09
HOXC6P09630 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.88■■□□□ 1.09
HOXC6P09630 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HOXC6P09630 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HOXC6P09630 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HOXC6P09630 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HOXC6P09630 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.88■■□□□ 1.09
HOXC6P09630 STARP1-201ENST00000397973 869 ntBASIC21.88■■□□□ 1.09
HOXC6P09630 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.88■■□□□ 1.09
HOXC6P09630 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.88■■□□□ 1.09
HOXC6P09630 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.88■■□□□ 1.09
HOXC6P09630 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.88■■□□□ 1.09
HOXC6P09630 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HOXC6P09630 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HOXC6P09630 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HOXC6P09630 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
HOXC6P09630 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.88■■□□□ 1.09
HOXC6P09630 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.88■■□□□ 1.09
HOXC6P09630 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
HOXC6P09630 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.87■■□□□ 1.09
HOXC6P09630 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC6P09630 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC6P09630 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.87■■□□□ 1.09
HOXC6P09630 AC112907.2-201ENST00000448639 330 ntBASIC21.87■■□□□ 1.09
HOXC6P09630 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC6P09630 ZNF444P1-201ENST00000559497 298 ntBASIC21.87■■□□□ 1.09
HOXC6P09630 CLEC4GP1-201ENST00000596555 870 ntBASIC21.87■■□□□ 1.09
HOXC6P09630 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC6P09630 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
HOXC6P09630 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC6P09630 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC6P09630 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC6P09630 KRT8P11-201ENST00000409686 1436 ntBASIC21.87■■□□□ 1.09
HOXC6P09630 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC6P09630 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC6P09630 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC6P09630 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC6P09630 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC6P09630 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC6P09630 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC6P09630 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC6P09630 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC6P09630 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.86■■□□□ 1.09
HOXC6P09630 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC6P09630 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.86■■□□□ 1.09
HOXC6P09630 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC6P09630 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC6P09630 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC6P09630 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC6P09630 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.86■■□□□ 1.09
HOXC6P09630 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.86■■□□□ 1.09
HOXC6P09630 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.86■■□□□ 1.09
HOXC6P09630 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HOXC6P09630 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HOXC6P09630 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HOXC6P09630 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HOXC6P09630 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
HOXC6P09630 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.85■■□□□ 1.09
HOXC6P09630 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.85■■□□□ 1.09
HOXC6P09630 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.85■■□□□ 1.09
HOXC6P09630 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HOXC6P09630 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
HOXC6P09630 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HOXC6P09630 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HOXC6P09630 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
HOXC6P09630 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
HOXC6P09630 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HOXC6P09630 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HOXC6P09630 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
HOXC6P09630 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
HOXC6P09630 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.84■■□□□ 1.09
HOXC6P09630 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms