Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COPEO14579 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPEO14579 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPEO14579 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COPEO14579 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPEO14579 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
COPEO14579 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPEO14579 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COPEO14579 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.35■□□□□ 0.69
COPEO14579 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COPEO14579 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
COPEO14579 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPEO14579 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPEO14579 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPEO14579 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
COPEO14579 ZNF815P-204ENST00000434898 1737 ntBASIC19.34■□□□□ 0.69
COPEO14579 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COPEO14579 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.34■□□□□ 0.69
COPEO14579 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
COPEO14579 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPEO14579 AC005082.1-201ENST00000413042 2259 ntBASIC19.34■□□□□ 0.69
COPEO14579 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPEO14579 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPEO14579 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.34■□□□□ 0.69
COPEO14579 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.34■□□□□ 0.69
COPEO14579 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.34■□□□□ 0.69
COPEO14579 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPEO14579 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.34■□□□□ 0.69
COPEO14579 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPEO14579 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPEO14579 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPEO14579 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPEO14579 AC009113.1-201ENST00000570267 2443 ntBASIC19.34■□□□□ 0.69
COPEO14579 AC026471.1-201ENST00000564629 3026 ntBASIC19.34■□□□□ 0.69
COPEO14579 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPEO14579 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.34■□□□□ 0.69
COPEO14579 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPEO14579 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COPEO14579 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COPEO14579 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPEO14579 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.34■□□□□ 0.69
COPEO14579 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.34■□□□□ 0.69
COPEO14579 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPEO14579 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
COPEO14579 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
COPEO14579 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COPEO14579 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.33■□□□□ 0.69
COPEO14579 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
COPEO14579 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPEO14579 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPEO14579 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPEO14579 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.33■□□□□ 0.69
COPEO14579 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPEO14579 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.33■□□□□ 0.69
COPEO14579 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPEO14579 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPEO14579 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.33■□□□□ 0.68
COPEO14579 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.33■□□□□ 0.68
COPEO14579 AC016769.1-201ENST00000409132 1010 ntBASIC19.33■□□□□ 0.68
COPEO14579 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COPEO14579 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.33■□□□□ 0.68
COPEO14579 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.33■□□□□ 0.68
COPEO14579 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.33■□□□□ 0.68
COPEO14579 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.33■□□□□ 0.68
COPEO14579 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.33■□□□□ 0.68
COPEO14579 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPEO14579 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
COPEO14579 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
COPEO14579 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.33■□□□□ 0.68
COPEO14579 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPEO14579 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.33■□□□□ 0.68
COPEO14579 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
COPEO14579 AC010980.2-201ENST00000587099 1412 ntBASIC19.33■□□□□ 0.68
COPEO14579 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COPEO14579 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.32■□□□□ 0.68
COPEO14579 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPEO14579 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COPEO14579 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.32■□□□□ 0.68
COPEO14579 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPEO14579 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPEO14579 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.32■□□□□ 0.68
COPEO14579 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COPEO14579 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.32■□□□□ 0.68
COPEO14579 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.32■□□□□ 0.68
COPEO14579 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPEO14579 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPEO14579 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
COPEO14579 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
COPEO14579 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.32■□□□□ 0.68
COPEO14579 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.32■□□□□ 0.68
COPEO14579 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.32■□□□□ 0.68
COPEO14579 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPEO14579 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPEO14579 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPEO14579 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
COPEO14579 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.32■□□□□ 0.68
COPEO14579 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COPEO14579 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COPEO14579 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COPEO14579 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms