Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.47□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tcrg-V4A0A0B4J1J8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.46□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.46□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.46□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Idnk-204ENSMUST00000226010 1898 ntBASIC12.45□□□□□ -0.42
Tcrg-V4A0A0B4J1J8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms