Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CSNK1G3Q9Y6M4 HSPD1P14-201ENST00000432666 1618 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 RHOT1P2-201ENST00000366423 333 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 ATF1P1-201ENST00000406040 927 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 NCSTNP1-201ENST00000406229 144 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 EIF1P3-201ENST00000423841 334 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AL157831.1-201ENST00000426134 473 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 MTCO1P43-201ENST00000431831 488 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AC011242.1-201ENST00000433596 1158 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AL035551.1-201ENST00000446931 348 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AC239367.2-201ENST00000447309 705 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 DDX39BP2-208ENST00000453923 258 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AC037198.2-201ENST00000478845 733 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 RNA5SP73-201ENST00000516744 108 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 IGLVIV-53-201ENST00000520107 367 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 OR5BC1P-201ENST00000529327 739 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 CYCSP28-201ENST00000534284 321 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 TVP23BP1-201ENST00000557500 617 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AC096947.1-201ENST00000603233 470 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AL161729.3-201ENST00000603533 673 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AC093875.1-201ENST00000623688 504 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AP003476.1-201ENST00000623984 516 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AC112484.5-201ENST00000624189 228 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 OR4G3P-201ENST00000633500 913 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 EOGT-210ENST00000615922 1931 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 IQCB2P-201ENST00000401788 1633 ntBASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CSNK1G3Q9Y6M4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 MFSD8-213ENST00000641134 1327 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 RNU1-14P-201ENST00000362759 152 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 RNA5SP307-201ENST00000362863 116 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 SNORA72.3-201ENST00000365074 132 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 RNU1-63P-201ENST00000383902 164 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 SNORA37-201ENST00000384504 129 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 RPS27AP11-201ENST00000402798 447 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 NRBF2P2-201ENST00000413087 861 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 MTND4P11-201ENST00000417020 1058 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 DYNLL1P7-201ENST00000429273 258 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 CDC27P1-201ENST00000445384 715 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 AC044797.1-201ENST00000445744 679 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 AL451050.1-201ENST00000450126 415 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 AC243772.1-201ENST00000451620 410 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 HMGB1P26-201ENST00000452520 628 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 RPS26P28-201ENST00000470806 348 ntBASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.23□□□□□ -1.73
CSNK1G3Q9Y6M4 RNA5SP446-201ENST00000515955 82 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms