Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 CYP1D1P-201ENST00000416662 1433 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 RPL32P3-201ENST00000359025 275 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 MIR331-201ENST00000362302 94 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 MIR3065-201ENST00000390137 79 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AL603865.2-201ENST00000401679 213 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC062016.2-201ENST00000420950 676 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC093422.3-201ENST00000428506 305 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC005912.1-201ENST00000495392 255 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC021146.5-201ENST00000503544 545 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 MTCYBP35-201ENST00000503630 1137 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 HIGD1AP18-201ENST00000520730 278 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 SMARCE1P4-201ENST00000523647 241 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 OR8I1P-201ENST00000529291 931 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AL049870.4-201ENST00000555741 486 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 MTCYBP23-201ENST00000558717 1102 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC027455.1-201ENST00000574104 594 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 MIR4789-201ENST00000577469 82 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC079587.1-201ENST00000603846 277 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC091979.2-201ENST00000607514 214 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 OR2BH1P-201ENST00000608850 864 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AL445423.1-201ENST00000609941 536 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AP004607.9-201ENST00000618202 316 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC006386.1-201ENST00000619436 415 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 Z99129.2-201ENST00000619967 314 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AC132825.7-201ENST00000638744 335 ntBASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNX9Q9Y5X1 AL133243.3-201ENST00000617415 3004 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 MFSD8-220ENST00000641243 1422 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 FAM3C2-201ENST00000312214 681 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 RNU6-666P-201ENST00000363499 107 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 LINC01347-201ENST00000417964 355 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 XKRYP1-201ENST00000423438 492 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 CHIAP3-201ENST00000423668 1133 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 ETF1P3-201ENST00000430422 1160 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 XKRYP2-201ENST00000432915 492 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AL035246.1-201ENST00000433554 1255 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 PPIAP13-201ENST00000434706 478 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AL357520.1-201ENST00000441557 453 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 DDX39BP2-208ENST00000453923 258 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 GTF2IP12-201ENST00000456547 356 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 RPL7P32-201ENST00000457119 744 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 MTCO2P6-201ENST00000463134 685 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 MTCO3P35-201ENST00000485582 781 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AC026979.1-201ENST00000492525 396 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 PRELID3BP5-201ENST00000508612 460 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 ZNF971P-201ENST00000562068 1249 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AC234772.3-201ENST00000602277 528 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AC073387.2-201ENST00000604797 784 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AL160290.3-201ENST00000604869 165 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AC113403.1-201ENST00000604910 193 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 uc_338.13-201ENST00000618243 179 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AP000484.1-201ENST00000620067 1252 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AC005086.4-201ENST00000623065 213 ntBASIC4.72□□□□□ -1.65
SNX9Q9Y5X1 AP000676.4-201ENST00000624659 623 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms