Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 NIPA2P1-201ENST00000426223 976 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 RBMY2QP-201ENST00000429799 1147 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AL357520.1-201ENST00000441557 453 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 VN1R10P-201ENST00000447106 875 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 SBDSP1-204ENST00000453858 737 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AC112206.1-201ENST00000468416 477 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AC087385.1-201ENST00000475062 312 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AC010486.2-201ENST00000505572 483 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AP000676.2-201ENST00000529711 301 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 OR4A45P-201ENST00000529954 901 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AC006349.1-201ENST00000555526 235 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AC018638.7-201ENST00000605836 1114 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 VIS1.1-201ENST00000610517 203 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AC108359.1-201ENST00000616451 1211 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AL136981.2-201ENST00000617319 734 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AC138965.3-201ENST00000623875 498 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AC073136.1-201ENST00000449426 2884 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AC004817.4-201ENST00000602396 3625 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AL592148.3-201ENST00000608771 2646 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 AC131971.1-201ENST00000332881 1482 ntBASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 SNRPEP3-201ENST00000338402 276 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 RN7SKP113-201ENST00000363891 295 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 ENSAP1-201ENST00000392855 326 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 GLULP6-201ENST00000399502 913 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AL109941.1-201ENST00000401925 229 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AL450338.1-201ENST00000407987 512 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 RN7SKP114-201ENST00000410327 279 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 VN1R54P-201ENST00000435210 1049 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 MTND4P6-201ENST00000438297 472 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 MTND5P2-201ENST00000442927 1142 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 KNOP1P3-201ENST00000446933 426 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 RPL26P28-201ENST00000451325 435 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 ART2BP-201ENST00000453501 499 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 RPL18AP17-201ENST00000455326 198 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 RPL5P22-201ENST00000480199 884 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AC231760.1-201ENST00000498002 260 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AC016065.2-201ENST00000514530 444 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 RNU6-583P-201ENST00000516012 92 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 RN7SKP277-201ENST00000516895 283 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 RN7SKP260-201ENST00000516907 149 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AC007834.2-201ENST00000536310 343 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 OSBPL9P5-201ENST00000542581 171 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 MIR4999-201ENST00000585029 91 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms