Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
PCDHGA6Q9Y5G7 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHGA6Q9Y5G7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 Y_RNA.194-201ENST00000363985 102 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 RNA5SP339-201ENST00000390987 122 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 VDAC2P1-201ENST00000399358 958 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 HMGB1P17-201ENST00000403495 628 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 RN7SKP213-201ENST00000410746 298 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC004022.2-201ENST00000413824 193 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 HMGN2P27-201ENST00000427352 270 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 SNRPEP7-201ENST00000438350 220 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC105399.1-202ENST00000447303 205 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 TRGVB-201ENST00000453257 471 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 RN7SL826P-201ENST00000479724 288 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 HMGN2P25-201ENST00000486956 268 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC004453.1-201ENST00000487895 408 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC087276.1-201ENST00000529659 480 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AP000873.5-201ENST00000533906 236 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC007115.1-201ENST00000546853 234 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC137768.1-201ENST00000549998 553 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 ROCK1P1-201ENST00000573767 549 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC011260.1-201ENST00000578420 472 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC103987.3-201ENST00000582071 292 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC073544.2-201ENST00000601155 540 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AP001981.2-201ENST00000603241 418 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 HSPE1P14-201ENST00000605812 302 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 KARSP3-201ENST00000571212 1504 ntBASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
PCDHGA6Q9Y5G7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 AC092681.1-201ENST00000297369 291 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 RNU4-91P-201ENST00000364778 135 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 RNU6-723P-201ENST00000383973 107 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 MIR765-201ENST00000390226 114 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 AL590609.2-201ENST00000421430 368 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 RPL36P19-201ENST00000430744 301 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 RPS20P1-201ENST00000434853 354 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 RPL23AP74-201ENST00000437246 471 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 TAF9P1-201ENST00000445421 515 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 KATNBL1P6-201ENST00000453433 915 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 TAF9P2-201ENST00000454958 515 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 COX6B1P2-201ENST00000489624 230 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 AL024509.2-201ENST00000493462 493 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 NDUFA5P12-201ENST00000503796 343 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 AC006499.2-201ENST00000513470 337 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 MTCYBP43-201ENST00000513621 740 ntBASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PCDHGA6Q9Y5G7 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms