Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 AP000526.1-201ENST00000603308 1388 ntBASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTDP1Q9Y5B0 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 RNA5SP87-201ENST00000384155 118 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 SNORA77-201ENST00000408716 125 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 RPL26P29-201ENST00000415623 438 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AC244035.1-201ENST00000430042 390 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 ELOCP10-201ENST00000440624 327 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AC090804.1-201ENST00000448870 490 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 SLC25A18P1-201ENST00000449385 454 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 TPT1P13-201ENST00000449760 499 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 CDC42P1-201ENST00000456658 548 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 RNU6-1308P-201ENST00000516817 103 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AC092709.1-201ENST00000521355 1045 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AC063949.1-201ENST00000552900 865 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AC095057.3-201ENST00000567102 1157 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 ATP5F1P7-201ENST00000567330 760 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 ZNF415P1-201ENST00000582279 1166 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 MIR4660-201ENST00000583549 74 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 MIR4737-201ENST00000583979 81 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AC008759.1-201ENST00000589783 983 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 RSL24D1P11-201ENST00000591045 491 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 VN1R88P-201ENST00000596787 292 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 VN1R82P-201ENST00000601481 356 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AF131215.7-201ENST00000602443 707 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AC078795.2-201ENST00000602835 1252 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 ELOCP34-201ENST00000604436 327 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AP005432.2-201ENST00000608162 586 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 VN1R7P-201ENST00000619242 903 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 AC024023.1-201ENST00000624530 922 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 SAMMSON-226ENST00000642089 1582 ntBASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.78□□□□□ -1.48
CTDP1Q9Y5B0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 Y_RNA.560-201ENST00000384689 102 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 HMGB3P18-201ENST00000406327 590 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 RNU6-757P-201ENST00000410334 100 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AL136231.1-201ENST00000429407 730 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 RPL7P11-201ENST00000437586 658 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 MTND3P1-201ENST00000441336 220 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 MTCYBP3-201ENST00000445588 1137 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 RPL30P6-201ENST00000475925 342 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AC068724.1-201ENST00000487100 792 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AC104971.1-201ENST00000495117 578 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AC023424.1-201ENST00000496058 459 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AC021146.8-201ENST00000507455 733 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AC098976.1-201ENST00000513014 541 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 PRELID3BP4-201ENST00000515476 571 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 RNU2-30P-201ENST00000516209 141 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 OR5AK3P-201ENST00000527486 1297 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AP000619.3-201ENST00000535634 1127 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AC137768.1-201ENST00000549998 553 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 HIGD1AP17-201ENST00000554576 276 ntBASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.77□□□□□ -1.49
CTDP1Q9Y5B0 AC068714.1-201ENST00000559623 800 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms