Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AL451139.1-201ENST00000434718 346 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AC079922.1-201ENST00000443291 359 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 OR13K1P-201ENST00000444577 975 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 KF459542.1-201ENST00000450908 553 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AC099670.1-201ENST00000455141 783 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 RPS20P32-201ENST00000456044 356 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 TRBVB-201ENST00000477100 408 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AC131392.1-201ENST00000506490 633 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AC138866.2-201ENST00000508650 584 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 GUSBP9-201ENST00000510138 584 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 SNORA25.11-201ENST00000515935 105 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 RNU4-71P-201ENST00000516258 113 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 SNORA25.14-201ENST00000516481 132 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 RNU6-570P-201ENST00000517051 105 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AC004805.3-201ENST00000603178 310 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 HMGB1P50-201ENST00000605814 607 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 RAD17P2-201ENST00000451754 1977 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AL136531.3-201ENST00000624378 3658 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 PABPC1P7-201ENST00000413177 1513 ntBASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 SFTPD-AS1-201ENST00000608229 5001 ntBASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 AP002364.1-201ENST00000623330 3386 ntBASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 RNU1-84P-201ENST00000365447 164 ntBASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 AC236972.1-201ENST00000433225 199 ntBASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 AC013403.1-201ENST00000436954 263 ntBASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 RPL23AP72-201ENST00000492447 435 ntBASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 RNU6-120P-201ENST00000516077 103 ntBASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 AL356432.3-201ENST00000568952 465 ntBASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 RN7SL475P-201ENST00000583379 298 ntBASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 AC012175.1-201ENST00000603755 531 ntBASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM35Q9UPQ4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AC046144.1-201ENST00000478559 1853 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AC005034.3-201ENST00000604845 1747 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 Y_RNA.170-201ENST00000363746 110 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 Y_RNA.200-201ENST00000364018 102 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 RNU1-149P-201ENST00000390870 161 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 AL157702.1-201ENST00000398764 426 ntBASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC8.58□□□□□ -1.04
TRIM35Q9UPQ4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms