Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RPS12P5-201ENST00000423449 371 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 RN7SL55P-201ENST00000464534 297 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 AC112484.3-201ENST00000505910 329 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 AL133153.1-201ENST00000557756 303 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 AMZ2P1-203ENST00000565833 850 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 VN1R84P-201ENST00000593697 235 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 ELOCP5-201ENST00000604924 333 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 AC000123.2-201ENST00000623124 461 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 MTND1P7-201ENST00000632801 297 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX6Q9UPM6 TRIM53BP-201ENST00000532912 1720 ntBASIC7.1□□□□□ -1.27
LHX6Q9UPM6 EXOC5P1-201ENST00000510543 1969 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AC016583.1-201ENST00000624221 2431 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AC139426.3-201ENST00000605648 2059 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 Y_RNA.27-201ENST00000362540 103 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 RNU4-81P-201ENST00000363561 144 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 Y_RNA.568-201ENST00000384742 113 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 Y_RNA.592-201ENST00000410274 109 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 RN7SKP205-201ENST00000410999 307 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 CYP4F30P-202ENST00000420048 405 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AC134879.1-201ENST00000426062 394 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AC079781.1-201ENST00000441505 394 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AL445991.1-201ENST00000450381 475 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 SRP68P2-201ENST00000456184 254 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AC104339.1-201ENST00000465478 348 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AP000926.1-201ENST00000479573 241 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 ATP5LP5-201ENST00000483050 299 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 RN7SL518P-201ENST00000491887 280 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AC114324.2-202ENST00000503812 134 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AC074133.1-201ENST00000515696 183 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 RNU6-64P-201ENST00000517119 105 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AC027288.2-201ENST00000553028 243 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 MIR3154-201ENST00000577829 84 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AC008962.1-201ENST00000605729 304 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AL161616.1-201ENST00000611867 286 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AC073592.6-201ENST00000624271 415 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AC010653.3-201ENST00000635332 232 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 MIR665-201ENST00000635949 72 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AC008725.1-201ENST00000605123 2263 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 EOGT-210ENST00000615922 1931 ntBASIC7.09□□□□□ -1.27
LHX6Q9UPM6 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.09□□□□□ -1.27
LHX6Q9UPM6 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
LHX6Q9UPM6 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.28
LHX6Q9UPM6 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
LHX6Q9UPM6 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX6Q9UPM6 HYDIN2-203ENST00000614586 13885 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms