Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTNNA3Q9UI47 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 AC083899.2-201ENST00000423285 1376 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 RNA5SP130-201ENST00000364431 114 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 MIR1251-201ENST00000408552 70 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 AL356095.1-201ENST00000417217 199 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 AC115285.1-201ENST00000424879 736 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 PPIAP17-201ENST00000438507 471 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 AL358232.1-201ENST00000448030 501 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 FABP3P2-201ENST00000453169 399 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 RPL5P13-201ENST00000462840 709 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 AL132838.2-201ENST00000492041 314 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 MIR2114-201ENST00000516645 80 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 AC022968.1-201ENST00000567372 442 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 AL137246.1-201ENST00000607072 977 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 AC103858.2-201ENST00000621471 543 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 CASC19-261ENST00000641853 1638 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 AC087565.3-202ENST00000642085 1603 ntBASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CTNNA3Q9UI47 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 RNU6-386P-201ENST00000362650 107 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 RNA5SP322-201ENST00000363617 119 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 RPL17P50-201ENST00000396131 546 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 PTMAP2-201ENST00000397627 327 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 HMGB3P19-201ENST00000403971 560 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 OR8G2P-201ENST00000412796 908 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 MTND2P25-201ENST00000449028 610 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 PRELID3BP7-201ENST00000503606 469 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 IGKV2-23-201ENST00000518729 323 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 AC091516.1-201ENST00000549191 703 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 AL049874.4-201ENST00000557593 255 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 AC141257.3-201ENST00000572906 215 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 AC015911.5-201ENST00000587076 451 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 AC095038.2-201ENST00000621464 1070 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 AL773545.4-201ENST00000637262 310 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 AC119674.1-212ENST00000641155 993 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 AL513478.4-201ENST00000641636 310 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 AC007390.2-201ENST00000606229 3803 ntBASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTNNA3Q9UI47 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 SNORA3C-201ENST00000408792 125 ntBASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 RPL7P2-201ENST00000427639 268 ntBASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 AL121578.1-201ENST00000428051 892 ntBASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 RPL5P32-201ENST00000454085 879 ntBASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 RNU7-27P-201ENST00000459281 62 ntBASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 AC068020.1-201ENST00000594215 661 ntBASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 MIR6867-201ENST00000610636 67 ntBASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 MIR6868-201ENST00000611215 58 ntBASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.8□□□□□ -1.64
CTNNA3Q9UI47 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms