Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNA5SP424-201ENST00000390988 115 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AL034374.1-201ENST00000406329 351 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 RN7SKP177-201ENST00000410567 355 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AMD1P2-201ENST00000412936 992 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 COX6CP17-201ENST00000421389 185 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 YY1P1-201ENST00000427625 668 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 OR4C10P-201ENST00000434991 931 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 SKP1P1-201ENST00000438081 489 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 RPL21P89-201ENST00000444021 467 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 H2AFZP6-201ENST00000444403 394 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 TPT1P12-201ENST00000448968 492 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AP000926.1-201ENST00000479573 241 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 CEACAMP10-202ENST00000495431 496 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC108471.1-201ENST00000513977 287 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 MTCO1P35-201ENST00000515270 228 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 IGKV2D-10-201ENST00000520194 281 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AP005901.4-201ENST00000577336 569 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AL163642.2-201ENST00000604722 1019 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC019131.2-201ENST00000609071 870 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 MIR378J-201ENST00000611988 109 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC022960.2-201ENST00000616300 666 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC079684.1-201ENST00000621405 437 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC105105.5-201ENST00000622635 1294 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 AC007342.7-201ENST00000624610 2337 ntBASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS29Q9UBQ0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 MT-TP-201ENST00000387461 68 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 SMC4P1-201ENST00000414479 527 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 AC048351.1-201ENST00000420064 602 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 OR6K4P-201ENST00000423179 955 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 AC093698.1-201ENST00000423843 571 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 AL390879.2-203ENST00000426943 1121 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 RPS27AP12-201ENST00000429552 465 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 MTCO3P21-201ENST00000430791 643 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 AC239809.1-201ENST00000450470 217 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 RN7SL323P-201ENST00000494712 295 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 AC010460.1-201ENST00000507087 466 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 MIR2116-201ENST00000517221 80 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 CYCSP30-201ENST00000546447 172 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 AL121766.1-201ENST00000547436 487 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 VN1R79P-201ENST00000593540 513 ntBASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS29Q9UBQ0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 RNA5SP283-201ENST00000365604 119 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AL034403.1-201ENST00000399414 885 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 MIR1183-201ENST00000408856 89 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AL691447.1-201ENST00000419456 387 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 TCEA1P2-201ENST00000420496 906 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 HMGB1P32-201ENST00000425971 565 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 SETD6P1-201ENST00000444575 317 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 NANOGP10-201ENST00000453325 895 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AC011037.1-201ENST00000483964 558 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 MIR2114-201ENST00000516645 80 ntBASIC3.59□□□□□ -1.83
VPS29Q9UBQ0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms