Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC010374.1-201ENST00000503762 1237 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 RN7SKP283-201ENST00000517197 270 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC090151.1-201ENST00000520784 730 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC010306.1-201ENST00000523223 1117 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 TRAV8-5-201ENST00000537369 341 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC084824.1-201ENST00000550917 1005 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 TVP23BP1-201ENST00000557500 617 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 VN1R85P-201ENST00000601587 426 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC005034.4-201ENST00000603612 899 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC067959.1-201ENST00000604334 379 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC023509.5-201ENST00000617434 807 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 MIR492-201ENST00000638676 116 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 MTCO1P18-201ENST00000455518 1419 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 RNA5SP175-201ENST00000364275 119 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 RNU1-44P-201ENST00000384453 163 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AL022722.2-201ENST00000402519 180 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 RPL23AP48-201ENST00000406913 488 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AL160275.2-201ENST00000412010 394 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 HMGB3P31-201ENST00000413333 595 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AL139095.3-201ENST00000419672 1203 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 OR5AW1P-201ENST00000426334 1006 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 UBE2V1P3-201ENST00000439651 417 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AL512326.1-201ENST00000443050 721 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 RPS27AP15-201ENST00000447672 466 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AC008958.1-201ENST00000511047 682 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AC074029.1-201ENST00000552531 1044 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AC125494.3-201ENST00000602759 455 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AL021368.1-201ENST00000607490 540 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AC024941.1-201ENST00000612250 334 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 MIR6864-201ENST00000617935 70 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 MIR8059-201ENST00000620427 81 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AC090506.2-201ENST00000624521 419 ntBASIC4.28□□□□□ -1.72
SPASTQ9UBP0 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SPASTQ9UBP0 LARP1BP1-201ENST00000506036 1359 ntBASIC4.27□□□□□ -1.73
SPASTQ9UBP0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
SPASTQ9UBP0 ERCC6-202ENST00000374127 1782 ntBASIC4.27□□□□□ -1.73
SPASTQ9UBP0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.27□□□□□ -1.73
SPASTQ9UBP0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SPASTQ9UBP0 KPNA2P2-201ENST00000419546 1489 ntBASIC4.27□□□□□ -1.73
SPASTQ9UBP0 RNA5SP151-201ENST00000365632 117 ntBASIC4.27□□□□□ -1.73
SPASTQ9UBP0 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SPASTQ9UBP0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SPASTQ9UBP0 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SPASTQ9UBP0 AL603766.1-201ENST00000407763 664 ntBASIC4.27□□□□□ -1.73
SPASTQ9UBP0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.27□□□□□ -1.73
SPASTQ9UBP0 NPM1P34-201ENST00000428821 893 ntBASIC4.27□□□□□ -1.73
SPASTQ9UBP0 ETF1P3-201ENST00000430422 1160 ntBASIC4.27□□□□□ -1.73
SPASTQ9UBP0 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.27□□□□□ -1.73
SPASTQ9UBP0 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms