Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC021171.1-201ENST00000603137 706 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC093799.2-201ENST00000610062 578 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 AC007786.3-201ENST00000615154 596 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 AL592148.3-201ENST00000608771 2646 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN1Q9P244 ZNF37BP-203ENST00000452306 1352 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 MTND4P34-201ENST00000572715 1371 ntBASIC4.77□□□□□ -1.65
LRFN1Q9P244 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LRFN1Q9P244 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN1Q9P244 Z73965.1-201ENST00000623412 2297 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 AL390862.1-201ENST00000635467 1469 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN1Q9P244 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN1Q9P244 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN1Q9P244 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AL109941.1-201ENST00000401925 229 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 TIMM9P2-201ENST00000419324 266 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 OR6C64P-201ENST00000419708 825 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC008072.1-201ENST00000434254 824 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC090018.1-201ENST00000434369 367 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 YWHAZP7-201ENST00000436906 631 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC104073.1-201ENST00000451988 151 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 RPL18AP17-201ENST00000455326 198 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 snoU13.20-201ENST00000459180 104 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC112206.1-201ENST00000468416 477 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 RN7SL189P-201ENST00000468631 289 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 AP000797.2-201ENST00000475768 606 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 RN7SKP234-201ENST00000517173 224 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC008814.1-201ENST00000603797 406 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 AP003117.2-201ENST00000606010 545 ntBASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN1Q9P244 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN1Q9P244 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN1Q9P244 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN1Q9P244 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
LRFN1Q9P244 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN1Q9P244 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN1Q9P244 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN1Q9P244 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN1Q9P244 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN1Q9P244 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN1Q9P244 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN1Q9P244 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN1Q9P244 OR10J6P-201ENST00000289731 930 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 FAM3C2-201ENST00000312214 681 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 OR56B2P-201ENST00000317102 954 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 SNRPEP3-201ENST00000338402 276 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 RNA5SP455-201ENST00000365190 119 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC092017.2-201ENST00000427600 362 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN1Q9P244 KCTD10P1-201ENST00000434203 625 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 RSL24D1P3-201ENST00000449255 495 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC104978.1-201ENST00000449387 391 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC083982.1-201ENST00000485679 344 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 HMGN2P25-201ENST00000486956 268 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms