Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AC007563.3-201ENST00000433233 371 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AL157827.1-201ENST00000447622 132 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AC098824.1-201ENST00000453565 980 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 RPL7P48-201ENST00000461513 746 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 ACTR6P1-201ENST00000514311 1104 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 RNA5SP179-201ENST00000517284 121 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 OR4C2P-201ENST00000530855 1064 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AP003117.1-201ENST00000602771 554 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AL133247.2-201ENST00000603236 482 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AC091167.4-201ENST00000605079 184 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AL355816.1-201ENST00000607951 118 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AL139089.1-201ENST00000620372 975 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AC015726.3-201ENST00000624501 418 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 CR381670.1-201ENST00000624291 1693 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AC066616.2-201ENST00000559334 1481 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC005261.4-201ENST00000600047 1385 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 HSPA8P1-201ENST00000425843 1833 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AL118496.1-201ENST00000440201 1812 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 RNU6-670P-201ENST00000364312 104 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC016397.1-201ENST00000412463 242 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 CASKP1-201ENST00000412870 582 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC108032.1-201ENST00000416706 207 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 OR5AW1P-201ENST00000426334 1006 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC017083.1-201ENST00000428093 483 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 MTCYBP12-201ENST00000440559 1134 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 DNAJC19P1-201ENST00000455312 319 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 RPS29P33-201ENST00000456717 146 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC084198.1-201ENST00000477747 402 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC105137.1-201ENST00000484355 562 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 ATG10-AS1-201ENST00000504846 648 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 RNA5SP309-201ENST00000516670 106 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 SUMO2P20-201ENST00000520803 283 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC084033.1-201ENST00000550830 633 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AL161713.1-201ENST00000555538 145 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC051619.2-201ENST00000559063 397 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 MIR5096-201ENST00000583713 70 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 IPO5P1-202ENST00000600039 287 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC090525.3-201ENST00000605601 189 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 AP002001.2-201ENST00000529025 1469 ntBASIC3.66□□□□□ -1.82
VAPAQ9P0L0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.66□□□□□ -1.82
VAPAQ9P0L0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
VAPAQ9P0L0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
VAPAQ9P0L0 CCT8P1-201ENST00000413611 1657 ntBASIC3.65□□□□□ -1.82
VAPAQ9P0L0 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.65□□□□□ -1.82
VAPAQ9P0L0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VAPAQ9P0L0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 ENSAP1-201ENST00000392855 326 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 RPS12P23-201ENST00000419579 400 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AC115285.1-201ENST00000424879 736 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms