Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 MIR423-201ENST00000362201 94 ntBASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 RNU6-356P-201ENST00000384140 107 ntBASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AC069218.2-201ENST00000411665 344 ntBASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AL590762.4-201ENST00000425885 253 ntBASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 NPM1P34-201ENST00000428821 893 ntBASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 RPL7P24-201ENST00000493052 752 ntBASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AC008638.1-201ENST00000506035 866 ntBASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AL592436.1-201ENST00000605135 558 ntBASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AC112503.1-201ENST00000608436 391 ntBASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AL354950.1-201ENST00000614150 568 ntBASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AC015726.3-201ENST00000624501 418 ntBASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AL137100.1-201ENST00000556703 1620 ntBASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.22□□□□□ -1.89
CTNNBIP1Q9NSA3 AC091152.2-201ENST00000591628 2569 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 RNU6-618P-201ENST00000363518 112 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 RNU1-132P-201ENST00000364300 164 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 HMGB1P13-201ENST00000406019 642 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC008065.1-201ENST00000428525 348 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 RPS3AP54-201ENST00000435535 734 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 RPS4XP4-201ENST00000443195 763 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 Z95152.1-201ENST00000453556 656 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC098824.1-201ENST00000453565 980 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 snoU13.1-201ENST00000459157 104 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 RPL37P6-202ENST00000464216 403 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC117394.1-201ENST00000477323 567 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC111000.3-201ENST00000508057 576 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 PTGES3P3-201ENST00000511479 482 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 RN7SKP234-201ENST00000517173 224 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC092747.2-201ENST00000545069 983 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC141257.3-201ENST00000572906 215 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 FAM60CP-201ENST00000591086 664 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC018754.1-201ENST00000607486 925 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AL049539.1-201ENST00000611964 459 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 MIR8058-201ENST00000615737 89 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 AC138915.3-201ENST00000562908 1389 ntBASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CTNNBIP1Q9NSA3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AL132640.2-201ENST00000559968 1698 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AL359715.4-201ENST00000606629 1436 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 RNU1-18P-201ENST00000363062 164 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AC009237.5-201ENST00000414271 501 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms