Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 AC008802.1-201ENST00000519121 791 ntBASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 AL137849.1-201ENST00000604767 169 ntBASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 AC112484.5-201ENST00000624189 228 ntBASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 AC093311.1-201ENST00000506586 2021 ntBASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 AL627171.1-201ENST00000618845 1308 ntBASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRTM1Q9HBL6 RLIMP1-201ENST00000339626 1680 ntBASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 RNA5SP97-201ENST00000365006 84 ntBASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 AL356095.1-201ENST00000417217 199 ntBASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 MIR2114-201ENST00000516645 80 ntBASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 MIR6867-201ENST00000610636 67 ntBASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 OR5AC4P-202ENST00000642086 985 ntBASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 AL445437.1-201ENST00000623157 3087 ntBASIC3.68□□□□□ -1.82
LRTM1Q9HBL6 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 RNU6-146P-201ENST00000384602 108 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 RPL21P65-201ENST00000406094 466 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 RPL21P109-201ENST00000422213 475 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 Z74696.2-201ENST00000436514 498 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AL645939.1-201ENST00000453429 797 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 RPL5P32-201ENST00000454085 879 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 MTND6P32-201ENST00000457611 483 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 EIF2S2P4-201ENST00000461070 984 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AC108941.1-201ENST00000502853 530 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 RNA5SP208-201ENST00000516156 78 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 SCARNA13-201ENST00000516672 275 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 RN7SKP209-201ENST00000516888 304 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AC135001.1-201ENST00000544546 283 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 MTND2P17-201ENST00000550281 688 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AC099489.2-201ENST00000574976 260 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AP005901.4-201ENST00000577336 569 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AC025946.2-201ENST00000603398 234 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AL645927.2-201ENST00000618350 349 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AC244205.2-202ENST00000635781 342 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 AL161912.2-201ENST00000565707 3007 ntBASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.67□□□□□ -1.82
LRTM1Q9HBL6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRTM1Q9HBL6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LRTM1Q9HBL6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
LRTM1Q9HBL6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LRTM1Q9HBL6 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.66□□□□□ -1.82
LRTM1Q9HBL6 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LRTM1Q9HBL6 AL589994.1-201ENST00000404962 340 ntBASIC3.66□□□□□ -1.82
LRTM1Q9HBL6 AL136131.1-201ENST00000406079 803 ntBASIC3.66□□□□□ -1.82
LRTM1Q9HBL6 RN7SKP159-201ENST00000410657 292 ntBASIC3.66□□□□□ -1.82
LRTM1Q9HBL6 MTND4LP21-201ENST00000415303 295 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms