Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RPS15AP40-201ENST00000419621 391 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC007435.1-201ENST00000421086 415 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC004448.2-201ENST00000422360 586 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 RPP40P1-201ENST00000426762 456 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC096632.1-201ENST00000427395 310 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC084290.1-201ENST00000434995 374 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 TDGF1P1-201ENST00000445734 527 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC079776.3-201ENST00000450665 370 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AL645937.3-201ENST00000453647 936 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 RNU6-885P-201ENST00000516607 104 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 HMGB3P26-201ENST00000560051 582 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 MIR4504-201ENST00000577413 92 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AL390838.2-201ENST00000602394 274 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 MTND3P19-201ENST00000603825 345 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC093424.1-201ENST00000604999 338 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 FAM27B-201ENST00000610601 213 ntBASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
BRF2Q9HAW0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 OR56B2P-201ENST00000317102 954 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 RN7SKP104-201ENST00000362605 328 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 RNA5SP123-201ENST00000363244 119 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 RNU4-92P-201ENST00000363783 136 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 SNORD116-23-201ENST00000384645 92 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 MIR921-201ENST00000401133 56 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AL078604.1-201ENST00000404609 466 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AL133264.1-201ENST00000407157 562 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AL356320.2-201ENST00000417263 507 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 BX510359.3-201ENST00000422168 306 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 XKRYP1-201ENST00000423438 492 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 Z93242.1-201ENST00000427102 353 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 XKRYP2-201ENST00000432915 492 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 SEPT7P5-201ENST00000434048 306 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AC241584.1-201ENST00000438469 1241 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 RPL7AP6-201ENST00000477943 801 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AC018797.3-201ENST00000513388 1241 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 RN7SKP287-201ENST00000516546 266 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AC090819.1-201ENST00000523800 1111 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 EDDM3DP-201ENST00000554692 434 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 MTND4P33-201ENST00000556706 766 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 COX6CP4-201ENST00000605798 228 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AP002782.1-201ENST00000623107 614 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AC006927.4-201ENST00000639187 543 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AC009452.1-201ENST00000640823 606 ntBASIC4.54□□□□□ -1.68
BRF2Q9HAW0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BRF2Q9HAW0 AC090229.1-201ENST00000590983 1609 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms