Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 RAD1P1-201ENST00000231383 813 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 RN7SKP227-201ENST00000364445 330 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 RNU6-317P-201ENST00000384031 107 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 RPL23AP48-201ENST00000406913 488 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 MIR1251-201ENST00000408552 70 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 RNU4-74P-201ENST00000411280 161 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 MED6P1-201ENST00000439659 713 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AC025181.1-201ENST00000477507 416 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 PRELID3BP7-201ENST00000503606 469 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AC010285.3-201ENST00000511668 676 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 SNORA31.9-201ENST00000516429 84 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AC007224.1-201ENST00000564410 144 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AL591034.3-201ENST00000605511 685 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 BX322635.1-201ENST00000605804 496 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 MIR6868-201ENST00000611215 58 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AC000123.2-201ENST00000623124 461 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AC015726.3-201ENST00000624501 418 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 AC068724.3-201ENST00000625906 87 ntBASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 RNU6-883P-201ENST00000384597 107 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AL356967.1-201ENST00000406305 431 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 RNA5SP39-201ENST00000411245 120 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AL356095.1-201ENST00000417217 199 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 TRIM60P13-201ENST00000432350 1283 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 KCTD9P3-201ENST00000434597 1169 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AC083863.1-201ENST00000438811 231 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 VN1R25P-201ENST00000443385 738 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 VN1R40P-201ENST00000455196 941 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 RPS7P7-201ENST00000463499 571 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AC111193.1-201ENST00000504097 155 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AC091516.1-201ENST00000549191 703 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AL109741.3-201ENST00000561748 592 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 SUMO2P14-201ENST00000604488 293 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AP004607.9-201ENST00000618202 316 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AL162233.1-201ENST00000620014 944 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 MIR4727-201ENST00000622232 55 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 AC124312.6-202ENST00000623624 418 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 RNA5SP196-201ENST00000625967 102 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 MIR6715B-201ENST00000637172 77 ntBASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCSER1Q9C0I3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 RNA5SP399-201ENST00000364003 117 ntBASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 RNA5SP130-201ENST00000364431 114 ntBASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 GCNT6-201ENST00000379591 934 ntBASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 RNU1-13P-201ENST00000384499 162 ntBASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 AL590290.1-201ENST00000405336 380 ntBASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 OR5BE1P-201ENST00000425977 939 ntBASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 RPS11P1-201ENST00000451072 473 ntBASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 HMGB1P5-202ENST00000451497 985 ntBASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 HMGB3P22-202ENST00000451823 572 ntBASIC4.49□□□□□ -1.69
CCSER1Q9C0I3 MTND3P4-201ENST00000453537 303 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms