Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC46A2Q9BY10 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC46A2Q9BY10 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC46A2Q9BY10 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
SLC46A2Q9BY10 MTCO1P7-201ENST00000419523 1542 ntBASIC5.22□□□□□ -1.57
SLC46A2Q9BY10 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC46A2Q9BY10 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC46A2Q9BY10 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
SLC46A2Q9BY10 SDAD1P1-202ENST00000524156 2051 ntBASIC5.22□□□□□ -1.57
SLC46A2Q9BY10 MTND4P31-201ENST00000425607 1343 ntBASIC5.22□□□□□ -1.57
SLC46A2Q9BY10 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SLC46A2Q9BY10 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SLC46A2Q9BY10 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
SLC46A2Q9BY10 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SLC46A2Q9BY10 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SLC46A2Q9BY10 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SLC46A2Q9BY10 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SLC46A2Q9BY10 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 RNU6-500P-201ENST00000362349 107 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 RNU5E-4P-201ENST00000364931 120 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 MIR192-201ENST00000384915 110 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 SNORA48.4-201ENST00000391089 134 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC114814.2-201ENST00000419195 485 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC007559.1-201ENST00000428736 355 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 RPL5P25-201ENST00000441148 775 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC011753.3-201ENST00000443436 406 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC027673.1-201ENST00000456245 405 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 TPT1P7-201ENST00000458300 517 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC072039.1-201ENST00000477611 581 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC010285.3-201ENST00000511668 676 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 RNU6-416P-201ENST00000516265 103 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 HMGB1P23-201ENST00000518743 568 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC136619.2-201ENST00000563361 631 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 MIR4666A-201ENST00000580160 79 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC083899.3-201ENST00000603413 594 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC009220.3-201ENST00000604318 586 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AL136981.2-201ENST00000617319 734 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC006840.1-201ENST00000623069 542 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AC073869.7-201ENST00000640874 297 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 NLRP3P1-201ENST00000622303 1785 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 SAMMSON-226ENST00000642089 1582 ntBASIC5.21□□□□□ -1.58
SLC46A2Q9BY10 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 AC099654.2-201ENST00000433031 1980 ntBASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 OR52E6-202ENST00000379946 954 ntBASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 RNU11-201ENST00000387069 134 ntBASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 RNA5SP241-201ENST00000391326 114 ntBASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 AC013442.1-201ENST00000397347 228 ntBASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 AL590290.1-201ENST00000405336 380 ntBASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 RNA5SP113-201ENST00000410486 84 ntBASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 AC007899.1-201ENST00000412776 775 ntBASIC5.2□□□□□ -1.58
SLC46A2Q9BY10 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms