Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 HIGD1AP3-201ENST00000515857 278 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 SNORD46.2-201ENST00000516021 102 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 RNA5SP400-201ENST00000517155 111 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AC139365.2-201ENST00000517972 253 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AC100784.1-201ENST00000522790 310 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AP000907.2-201ENST00000530827 353 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AP003385.6-201ENST00000531603 374 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 EEF1B2P4-201ENST00000551398 348 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AC073091.2-201ENST00000603205 907 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AC007684.1-201ENST00000609671 477 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AC006329.2-201ENST00000611491 394 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AC091304.9-201ENST00000612091 226 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AL158209.2-201ENST00000619266 216 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AL137067.2-201ENST00000621202 131 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 MIR4302-201ENST00000638058 60 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AC099654.13-201ENST00000639774 207 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 SNORA17A-201ENST00000391185 133 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AL353777.1-201ENST00000425552 326 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 PRPF38AP1-201ENST00000451976 933 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 MTCO3P20-201ENST00000454926 688 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AL122020.1-201ENST00000472287 459 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 RN7SL273P-201ENST00000481561 299 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AC114728.1-201ENST00000488289 483 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 RN7SL101P-201ENST00000496350 279 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 NPM1P41-201ENST00000512920 831 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 RN7SKP67-201ENST00000515905 235 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 HMGN1P30-201ENST00000589286 268 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AC008521.2-201ENST00000591021 259 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AC245014.2-201ENST00000603689 287 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AL162431.4-201ENST00000604674 411 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AC004853.1-201ENST00000604902 698 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AC246785.4-201ENST00000605374 287 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AC009159.1-201ENST00000618386 642 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 AC012020.1-201ENST00000624541 1728 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 SNORA17.5-201ENST00000630429 132 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 OR11H2-202ENST00000641517 1085 ntBASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAIPQ9BWF2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRAIPQ9BWF2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
TRAIPQ9BWF2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRAIPQ9BWF2 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAIPQ9BWF2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
TRAIPQ9BWF2 AC008033.1-201ENST00000216407 1162 ntBASIC6.62□□□□□ -1.35
TRAIPQ9BWF2 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRAIPQ9BWF2 RNA5SP510-201ENST00000364697 99 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms