Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 RANP3-201ENST00000530970 276 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 AL133153.1-201ENST00000557756 303 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
USB1Q9BQ65 RN7SL657P-201ENST00000582431 293 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC012443.1-201ENST00000605605 231 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC135050.6-202ENST00000613584 392 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC073488.7-201ENST00000633785 778 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 AC008957.3-201ENST00000624112 2242 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USB1Q9BQ65 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
USB1Q9BQ65 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
USB1Q9BQ65 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 AL445437.1-201ENST00000623157 3087 ntBASIC6.59□□□□□ -1.35
USB1Q9BQ65 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
USB1Q9BQ65 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
USB1Q9BQ65 MKI67P1-201ENST00000604297 1460 ntBASIC6.59□□□□□ -1.36
USB1Q9BQ65 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
USB1Q9BQ65 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
USB1Q9BQ65 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
USB1Q9BQ65 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
USB1Q9BQ65 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
USB1Q9BQ65 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.59□□□□□ -1.36
USB1Q9BQ65 THAP12P7-201ENST00000520248 2290 ntBASIC6.59□□□□□ -1.36
USB1Q9BQ65 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USB1Q9BQ65 KARSP2-201ENST00000415696 1639 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USB1Q9BQ65 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
USB1Q9BQ65 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USB1Q9BQ65 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
USB1Q9BQ65 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USB1Q9BQ65 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USB1Q9BQ65 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USB1Q9BQ65 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USB1Q9BQ65 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USB1Q9BQ65 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 AL445189.1-201ENST00000405722 338 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 RPL12P10-201ENST00000413498 498 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 RPSAP1-201ENST00000421328 880 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 ELOCP20-201ENST00000422460 345 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 SNX18P14-201ENST00000429308 574 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AL645936.2-201ENST00000430565 928 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AL954705.1-201ENST00000435277 559 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC245028.2-201ENST00000458673 253 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 RPL9P32-201ENST00000464118 620 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 RPL23AP8-201ENST00000479812 475 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 TECRP2-201ENST00000503270 928 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 MRPL49P1-201ENST00000505951 535 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 SSX8-201ENST00000506270 579 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC093816.1-201ENST00000515076 913 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC097486.1-201ENST00000515331 210 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC040926.1-201ENST00000530195 238 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC091516.1-201ENST00000549191 703 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 AL132640.2-202ENST00000559732 614 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 SUB1P3-201ENST00000564581 315 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC040162.2-201ENST00000573092 157 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 MIR4685-201ENST00000578185 69 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC090241.1-201ENST00000587732 621 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 RPS11-203ENST00000596873 583 ntTSL 2 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 SNX29P2-204ENST00000603801 875 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC010201.1-201ENST00000605051 540 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 HMGB1P50-201ENST00000605814 607 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 AL161423.1-201ENST00000613700 262 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 AL138825.1-201ENST00000618587 192 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC129908.1-201ENST00000624553 648 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 AL157713.1-201ENST00000379752 1531 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms