Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC117532.1-201ENST00000514638 323 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 OR5D15P-201ENST00000531671 942 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 AC068446.3-201ENST00000555285 382 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS50Q96JG6 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 AC011487.3-201ENST00000593607 453 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 RNF138P2-201ENST00000603490 592 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 AC124312.4-201ENST00000605533 310 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 OR2AS2P-201ENST00000606902 342 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 AC072039.2-201ENST00000608883 439 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 AC090246.1-201ENST00000616499 426 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 LINC00901.1-201ENST00000617252 152 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 AC023509.5-201ENST00000617434 807 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 AC018926.3-201ENST00000618841 406 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 AL353662.3-201ENST00000625131 237 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 AC116618.1-201ENST00000634617 774 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS50Q96JG6 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 AC109315.1-201ENST00000584143 1347 ntBASIC4.92□□□□□ -1.62
VPS50Q96JG6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS50Q96JG6 MAPK10-320ENST00000641462 6696 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS50Q96JG6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS50Q96JG6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS50Q96JG6 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS50Q96JG6 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 U3.2-201ENST00000362981 210 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS50Q96JG6 MIR217-201ENST00000384817 110 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 AL590084.2-201ENST00000401481 382 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 AL139128.1-201ENST00000413921 941 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 P2RY10P2-201ENST00000416730 913 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 MORF4L1P6-201ENST00000418771 268 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 MTND4P20-201ENST00000424125 869 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 YWHAZP7-201ENST00000436906 631 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 AL031663.1-201ENST00000437445 219 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 AC118469.1-201ENST00000442943 488 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 BX842559.2-201ENST00000451418 605 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 AC073387.1-201ENST00000453261 709 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 AL035090.1-201ENST00000454835 332 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 RNU6-1218P-201ENST00000458990 108 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 RPL23AP71-201ENST00000470966 469 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS50Q96JG6 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 AC111000.2-201ENST00000507775 550 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 HSPE1P23-201ENST00000509838 286 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS50Q96JG6 RNU6-232P-201ENST00000517144 64 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 RN7SKP283-201ENST00000517197 270 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 AP001317.1-201ENST00000531194 960 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 PDCD5P1-201ENST00000543528 309 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 AC010200.2-201ENST00000605098 235 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 AL049539.1-201ENST00000611964 459 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 AC121761.2-201ENST00000617300 689 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 AC079248.2-201ENST00000623779 326 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 AC068620.4-201ENST00000636730 1182 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS50Q96JG6 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.91□□□□□ -1.62
VPS50Q96JG6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
VPS50Q96JG6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS50Q96JG6 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS50Q96JG6 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.9□□□□□ -1.62
VPS50Q96JG6 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS50Q96JG6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 397.8 ms