Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC095038.2-201ENST00000621464 1070 ntBASIC4.46□□□□□ -1.7
VMP1Q96GC9 AC106730.3-201ENST00000624568 641 ntBASIC4.46□□□□□ -1.7
VMP1Q96GC9 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.46□□□□□ -1.7
VMP1Q96GC9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VMP1Q96GC9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.46□□□□□ -1.7
VMP1Q96GC9 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.46□□□□□ -1.7
VMP1Q96GC9 AC010300.1-201ENST00000600671 5134 ntBASIC4.46□□□□□ -1.7
VMP1Q96GC9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VMP1Q96GC9 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
VMP1Q96GC9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VMP1Q96GC9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VMP1Q96GC9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VMP1Q96GC9 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VMP1Q96GC9 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VMP1Q96GC9 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
VMP1Q96GC9 ZNF603P-201ENST00000405613 487 ntBASIC4.45□□□□□ -1.7
VMP1Q96GC9 U3.35-201ENST00000408405 208 ntBASIC4.45□□□□□ -1.7
VMP1Q96GC9 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 AC005154.2-201ENST00000438110 379 ntBASIC4.45□□□□□ -1.7
VMP1Q96GC9 AC016831.4-201ENST00000438302 307 ntBASIC4.45□□□□□ -1.7
VMP1Q96GC9 AC002542.1-201ENST00000440683 193 ntBASIC4.45□□□□□ -1.7
VMP1Q96GC9 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 RPS26P28-201ENST00000470806 348 ntBASIC4.45□□□□□ -1.7
VMP1Q96GC9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 SNORA70.14-201ENST00000516205 110 ntBASIC4.45□□□□□ -1.7
VMP1Q96GC9 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 IGJP1-201ENST00000522682 475 ntBASIC4.45□□□□□ -1.7
VMP1Q96GC9 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 MIR4700-201ENST00000578311 74 ntBASIC4.45□□□□□ -1.7
VMP1Q96GC9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 AC124283.4-201ENST00000581815 456 ntBASIC4.45□□□□□ -1.7
VMP1Q96GC9 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 AC097372.4-201ENST00000625025 466 ntBASIC4.45□□□□□ -1.7
VMP1Q96GC9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VMP1Q96GC9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VMP1Q96GC9 ZFRP1-201ENST00000457579 2970 ntBASIC4.45□□□□□ -1.7
VMP1Q96GC9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VMP1Q96GC9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 AL442639.1-201ENST00000625030 1899 ntBASIC4.45□□□□□ -1.7
VMP1Q96GC9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VMP1Q96GC9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VMP1Q96GC9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VMP1Q96GC9 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
VMP1Q96GC9 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VMP1Q96GC9 SNORD6-201ENST00000365444 73 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 SNORD65C-201ENST00000390962 71 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 MIR921-201ENST00000401133 56 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.44□□□□□ -1.7
VMP1Q96GC9 RSU1P3-201ENST00000412878 835 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 RGS17P1-201ENST00000423358 553 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 AC005517.2-201ENST00000424673 553 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 AC010881.1-201ENST00000433830 235 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 AL138799.3-201ENST00000438968 350 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.44□□□□□ -1.7
VMP1Q96GC9 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.44□□□□□ -1.7
VMP1Q96GC9 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.44□□□□□ -1.7
VMP1Q96GC9 ANP32BP2-201ENST00000454525 545 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 RPL9P32-201ENST00000464118 620 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 RPS29P22-201ENST00000472363 168 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 AC007686.1-201ENST00000488511 463 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 AC104164.2-201ENST00000496953 495 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VMP1Q96GC9 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VMP1Q96GC9 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.44□□□□□ -1.7
VMP1Q96GC9 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.44□□□□□ -1.7
VMP1Q96GC9 AP004242.1-201ENST00000533701 349 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.44□□□□□ -1.7
VMP1Q96GC9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.44□□□□□ -1.7
VMP1Q96GC9 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.44□□□□□ -1.7
VMP1Q96GC9 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.44□□□□□ -1.7
VMP1Q96GC9 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
VMP1Q96GC9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.44□□□□□ -1.7
VMP1Q96GC9 AC068790.5-201ENST00000602741 355 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 AC104785.1-201ENST00000603220 588 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 AC098935.2-201ENST00000604222 466 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 COX6CP4-201ENST00000605798 228 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 AL512506.1-201ENST00000613918 449 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 MIR6853-201ENST00000619642 74 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 AC020923.1-201ENST00000624021 917 ntBASIC4.44□□□□□ -1.7
VMP1Q96GC9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.44□□□□□ -1.7
VMP1Q96GC9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.44□□□□□ -1.7
VMP1Q96GC9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VMP1Q96GC9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms