Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMGB4Q8WW32 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AP000542.2-201ENST00000623199 6179 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AC010300.1-201ENST00000600671 5134 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 PHKBP1-201ENST00000450951 1951 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AL442639.1-201ENST00000625030 1899 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 RNU6-582P-201ENST00000362989 107 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 SNORD113.2-201ENST00000364166 89 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 SNORD116-23-201ENST00000384645 92 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AL161909.1-201ENST00000397390 712 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AL139098.1-201ENST00000407291 389 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 RNA5SP345-201ENST00000410646 108 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 RPL12P9-201ENST00000412942 488 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 NRBF2P2-201ENST00000413087 861 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 ATG4AP1-201ENST00000416893 538 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 RPL37P1-201ENST00000432310 284 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AL008629.1-201ENST00000438615 184 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 GAPDHP14-201ENST00000450472 937 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AC091868.1-201ENST00000508746 304 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 RNA5SP230-201ENST00000517039 122 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AP001207.1-201ENST00000524051 481 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AC110743.1-201ENST00000584870 478 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AC008687.2-201ENST00000597865 520 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AL353778.1-201ENST00000603149 408 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AC096553.1-201ENST00000605169 829 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AL121932.1-201ENST00000605542 214 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 AL121873.1-201ENST00000616013 524 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 CU459211.1-201ENST00000635667 749 ntBASIC4.84□□□□□ -1.63
HMGB4Q8WW32 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGB4Q8WW32 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.84□□□□□ -1.64
HMGB4Q8WW32 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HMGB4Q8WW32 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
HMGB4Q8WW32 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HMGB4Q8WW32 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HMGB4Q8WW32 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.84□□□□□ -1.64
HMGB4Q8WW32 DBF4P1-201ENST00000412976 1892 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AC092376.2-201ENST00000622621 4116 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 RNA5SP447-201ENST00000363749 119 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 RNU1-82P-201ENST00000390851 165 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 RNU6-1300P-201ENST00000391046 108 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 RNA5SP80-201ENST00000410475 111 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AC004690.1-201ENST00000418216 328 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 CHIAP3-201ENST00000423668 1133 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 USP9YP11-201ENST00000427537 717 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 MTND1P32-201ENST00000433043 938 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 RPL21P134-201ENST00000453468 483 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 RPS17P2-201ENST00000461663 408 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AC083829.1-201ENST00000503756 657 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms