Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 AC016930.1-201ENST00000468766 2205 ntBASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.6□□□□□ -1.35
SNIP1Q8TAD8 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 Y_RNA.64-201ENST00000362845 102 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 SNORD27-201ENST00000363981 72 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 RNA5SP433-201ENST00000364491 114 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 Y_RNA.274-201ENST00000364714 101 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 Y_RNA.297-201ENST00000364950 91 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 MIR558-201ENST00000384920 94 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 RNU6-1055P-201ENST00000391085 107 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AL031985.1-201ENST00000392713 418 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 ARF4P3-201ENST00000397387 509 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 RAC1P3-201ENST00000416129 580 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC233981.1-201ENST00000423224 461 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 RBMY1KP-201ENST00000423480 476 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC115283.1-201ENST00000427353 400 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 SUMO2P3-201ENST00000438311 288 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 ATP5LP2-201ENST00000440646 311 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC079922.1-201ENST00000443291 359 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 RPL36AP15-201ENST00000444514 266 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 Z83838.1-202ENST00000456225 839 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC099340.1-201ENST00000475247 599 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 RPS4XP14-201ENST00000493072 781 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC116562.3-201ENST00000506136 177 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 IGKV2D-10-201ENST00000520194 281 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC087752.2-201ENST00000521219 281 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC068587.5-201ENST00000528506 175 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 LSM3P2-201ENST00000551246 273 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC084783.1-201ENST00000565846 910 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 RN7SL199P-201ENST00000578752 281 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 RN7SL656P-201ENST00000579044 281 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 RN7SL270P-201ENST00000579643 281 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 RN7SL178P-201ENST00000582930 304 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 DUSP12P1-201ENST00000612874 516 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AL627230.1-201ENST00000613077 211 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 RN7SL261P-201ENST00000613441 282 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC025162.2-201ENST00000619602 560 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 U6.101-201ENST00000637707 76 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 MTCO1P24-201ENST00000515438 1558 ntBASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
SNIP1Q8TAD8 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SNIP1Q8TAD8 OR55B1P-203ENST00000641518 2602 ntBASIC6.59□□□□□ -1.36
SNIP1Q8TAD8 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.59□□□□□ -1.36
SNIP1Q8TAD8 USP9YP4-201ENST00000424401 1745 ntBASIC6.59□□□□□ -1.36
SNIP1Q8TAD8 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.59□□□□□ -1.36
SNIP1Q8TAD8 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
SNIP1Q8TAD8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNIP1Q8TAD8 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.58□□□□□ -1.36
SNIP1Q8TAD8 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SNIP1Q8TAD8 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.58□□□□□ -1.36
SNIP1Q8TAD8 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.58□□□□□ -1.36
SNIP1Q8TAD8 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNIP1Q8TAD8 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.58□□□□□ -1.36
SNIP1Q8TAD8 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.58□□□□□ -1.36
SNIP1Q8TAD8 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SNIP1Q8TAD8 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
SNIP1Q8TAD8 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms