Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC096553.1-201ENST00000605169 829 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AC124312.4-201ENST00000605533 310 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AC122133.1-201ENST00000613964 233 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AC091931.1-201ENST00000623488 728 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AC015726.3-201ENST00000624501 418 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AC005618.4-201ENST00000625053 554 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 Z99496.1-201ENST00000469424 1477 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AC015813.6-201ENST00000624409 5808 ntBASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.94□□□□□ -1.46
SMC1BQ8NDV3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AL445523.1-201ENST00000451184 1362 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AC025263.3-201ENST00000622965 1396 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 RNA5SP397-201ENST00000391323 118 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 GSTA8P-201ENST00000404253 637 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 RPL7P4-203ENST00000430239 730 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 MTCO2P7-201ENST00000446518 666 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 TPTE2P5-203ENST00000458118 728 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 SNORD125-201ENST00000459538 96 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 SYPL1P1-201ENST00000473622 768 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 MTND3P7-201ENST00000474435 343 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AC091912.1-201ENST00000511351 248 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AC105185.1-201ENST00000518705 535 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AC135628.1-201ENST00000568867 534 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AL590229.1-201ENST00000603497 542 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AC090948.2-201ENST00000607363 564 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 CR381572.2-201ENST00000624852 397 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 AP005432.1-201ENST00000580891 3485 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 ZNF652P1-201ENST00000442420 1309 ntBASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SMC1BQ8NDV3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 RNU6-304P-201ENST00000364855 107 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 RNU1-74P-201ENST00000384108 171 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 SNORD65.1-201ENST00000390889 71 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 RPS26P8-201ENST00000393490 348 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 OR51A3P-201ENST00000413596 924 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 UQCRBP1-201ENST00000421129 336 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AC138761.5-201ENST00000433967 325 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AL031663.1-201ENST00000437445 219 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AC092809.1-201ENST00000441469 474 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 PHBP16-201ENST00000446318 950 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 NUTF2P3-201ENST00000448540 384 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 RPL5P24-201ENST00000463742 885 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 RPL7P19-201ENST00000469948 618 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms