Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC010627.1-201ENST00000503819 1294 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 HPRT1P2-201ENST00000505250 544 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 AC133963.2-201ENST00000513686 578 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 RNU6-347P-201ENST00000516658 105 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 CYP4A43P-201ENST00000568156 121 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 MIR5684-201ENST00000585074 65 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 AC079610.2-201ENST00000604818 690 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 AC114878.2-201ENST00000604863 1251 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 AC055764.2-201ENST00000610089 670 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 MIR6867-201ENST00000610636 67 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 MIR6798-201ENST00000612887 67 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 ZYXP1-201ENST00000617638 118 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 AC020978.9-201ENST00000624380 1141 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 AC016717.3-201ENST00000624730 554 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 Z82217.1-201ENST00000625157 8149 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 AC018529.3-201ENST00000624212 2254 ntBASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
C9orf40Q8IXQ3 AC015813.6-201ENST00000624409 5808 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AP000357.1-201ENST00000409926 1165 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AL158825.1-201ENST00000414735 521 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AL158050.1-201ENST00000416077 457 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AC073136.2-201ENST00000417282 849 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 PNRC2P1-201ENST00000423940 420 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 YWHAEP5-201ENST00000431545 765 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 MTND6P18-201ENST00000439477 513 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 RPS4XP4-201ENST00000443195 763 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 PTMAP3-201ENST00000447474 330 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AC005229.2-201ENST00000456995 399 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 RNU6-1218P-201ENST00000458990 108 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 RPL38P1-201ENST00000460914 211 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 RPL23AP12-201ENST00000467573 473 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AC093267.1-201ENST00000489176 961 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AC005912.1-201ENST00000495392 255 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AC092451.2-201ENST00000538746 658 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 RPL23AP87-202ENST00000573039 466 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 BNIP3P19-201ENST00000605397 577 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AC011374.2-201ENST00000607135 526 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 RNU4-89P-201ENST00000607443 133 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 MIR8084-201ENST00000614105 89 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AC016957.2-201ENST00000616998 848 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AL731566.2-201ENST00000618971 317 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AC068831.8-201ENST00000620171 435 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AP002371.2-201ENST00000624450 503 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AP005264.7-201ENST00000625003 745 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 USP9YP4-201ENST00000424401 1745 ntBASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
C9orf40Q8IXQ3 AC010329.2-201ENST00000595195 2737 ntBASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 RLIMP1-201ENST00000339626 1680 ntBASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 AL603766.1-201ENST00000407763 664 ntBASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 HSPE1P12-201ENST00000412576 301 ntBASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 PGBD4P8-201ENST00000412993 562 ntBASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 AC009302.1-201ENST00000417147 390 ntBASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 AL606495.1-201ENST00000422100 813 ntBASIC3.79□□□□□ -1.8
C9orf40Q8IXQ3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms