Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 AC097714.1-201ENST00000511272 1647 ntBASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
NPAS4Q8IUM7 AC133552.1-201ENST00000569988 4007 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC005332.5-201ENST00000591222 2919 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 RNU4-12P-201ENST00000365233 139 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 MYL6P5-201ENST00000412707 459 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 OR6E1P-201ENST00000414424 923 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC138393.2-201ENST00000414742 246 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 RPS27AP6-201ENST00000427962 448 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 TIMM9P3-201ENST00000428659 274 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 MTND4LP10-201ENST00000435146 291 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AL627308.1-201ENST00000435693 821 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 NFU1P2-201ENST00000448700 469 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 HMGB1P15-201ENST00000453854 435 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AL672167.3-201ENST00000465951 960 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 RN7SL799P-201ENST00000475891 298 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC093267.1-201ENST00000489176 961 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC093767.1-201ENST00000504523 156 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 TXNP6-201ENST00000510190 310 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC046134.1-201ENST00000514454 666 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 RAB11AP2-201ENST00000545905 639 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC090616.5-202ENST00000582111 297 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC011468.4-201ENST00000603942 409 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC091193.1-201ENST00000604640 448 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC211433.2-201ENST00000608433 387 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC010133.1-201ENST00000615809 842 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC009318.4-201ENST00000620496 486 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC022164.1-201ENST00000568767 2673 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 OR55B1P-203ENST00000641518 2602 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 AC022819.1-201ENST00000563495 3910 ntBASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
NPAS4Q8IUM7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 Y_RNA.9-201ENST00000362354 101 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 RNU6-28P-201ENST00000362378 107 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 RNU1-130P-201ENST00000363930 160 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 RNY4P34-201ENST00000364779 95 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 RNU6-744P-201ENST00000365557 107 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 RNU6-116P-201ENST00000384042 109 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 RNU6-1316P-201ENST00000384242 108 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 RNU6-878P-201ENST00000384578 110 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 GSTA9P-201ENST00000406231 611 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 RN7SKP285-201ENST00000410137 318 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 AC104837.2-201ENST00000427236 424 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 CLUHP1-201ENST00000435012 1190 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 AC104073.1-201ENST00000451988 151 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 RN7SL184P-201ENST00000488308 297 ntBASIC6.34□□□□□ -1.39
NPAS4Q8IUM7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms