Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AL365361.1-201ENST00000566942 3481 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 ZNF807-201ENST00000328088 1707 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 FRG1CP-201ENST00000358464 769 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AC004448.2-201ENST00000422360 586 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AC113192.3-201ENST00000529152 742 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 SLC25A36P1-201ENST00000590111 465 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 VN1R104P-201ENST00000505115 1009 ntBASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
CSMD3Q7Z407 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 RNU6-7-201ENST00000364784 107 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 RNU6-8-201ENST00000365467 107 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 MIR3162-201ENST00000581818 82 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 CKS1BP3-201ENST00000600888 237 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 AL163642.2-201ENST00000604722 1019 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 AC234772.1-201ENST00000377927 937 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 SNORA54-201ENST00000384281 123 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 SNORA44-201ENST00000384584 132 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 RNA5SP424-201ENST00000390988 115 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 GEMIN8P3-201ENST00000445417 720 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 IGKV2-26-201ENST00000518305 343 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 AC008011.1-201ENST00000545989 227 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 AC011503.2-201ENST00000594230 1500 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 AC010740.1-201ENST00000417035 684 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 RPL36AP10-201ENST00000421785 322 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 AC008885.1-201ENST00000514930 301 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 AL136360.1-201ENST00000503377 1900 ntBASIC2.47□□□□□ -2.01
CSMD3Q7Z407 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC2.47□□□□□ -2.01
CSMD3Q7Z407 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC2.46□□□□□ -2.01
CSMD3Q7Z407 DLD-204ENST00000437604 1859 ntTSL 2 BASIC2.46□□□□□ -2.01
CSMD3Q7Z407 AL645937.1-201ENST00000641739 1652 ntBASIC2.46□□□□□ -2.01
CSMD3Q7Z407 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC2.46□□□□□ -2.01
CSMD3Q7Z407 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.01
CSMD3Q7Z407 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC2.46□□□□□ -2.01
CSMD3Q7Z407 RNA5SP229-201ENST00000410809 99 ntBASIC2.46□□□□□ -2.01
CSMD3Q7Z407 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.46□□□□□ -2.01
CSMD3Q7Z407 AL512310.1-201ENST00000548639 172 ntBASIC2.46□□□□□ -2.01
CSMD3Q7Z407 MIR3936-201ENST00000584304 110 ntBASIC2.46□□□□□ -2.01
CSMD3Q7Z407 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC2.46□□□□□ -2.01
CSMD3Q7Z407 AL354760.1-201ENST00000608357 643 ntBASIC2.46□□□□□ -2.01
CSMD3Q7Z407 AL162274.2-201ENST00000614406 332 ntBASIC2.46□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms