Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 AC004865.1-201ENST00000442276 1003 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 AL137845.2-201ENST00000444292 988 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 FAR2P1-206ENST00000449736 709 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 PNPLA4P1-201ENST00000458328 305 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 RN7SL174P-201ENST00000475578 289 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 RN7SL319P-201ENST00000480656 221 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 UBA52P7-201ENST00000486088 380 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHFQ7M4L6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHFQ7M4L6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 WBP1LP4-201ENST00000505043 344 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHFQ7M4L6 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 RNU6-885P-201ENST00000516607 104 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 AF279873.1-201ENST00000523393 313 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHFQ7M4L6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 FKBP1BP1-201ENST00000553366 325 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 HIGD1AP17-201ENST00000554576 276 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 AC090888.3-201ENST00000558917 509 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHFQ7M4L6 Z99497.2-201ENST00000603634 310 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 AL031281.1-201ENST00000604049 488 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 AC091488.1-201ENST00000604239 660 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 AC133552.5-201ENST00000604266 540 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 COX6CP4-201ENST00000605798 228 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 AL355816.1-201ENST00000607951 118 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHFQ7M4L6 AL139418.1-201ENST00000613613 177 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 AC121761.2-201ENST00000617300 689 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHFQ7M4L6 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHFQ7M4L6 AC091046.3-201ENST00000631455 1574 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHFQ7M4L6 MAPK10-303ENST00000641324 3959 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 MTND4P26-201ENST00000415971 1359 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC134882.1-201ENST00000603738 1676 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHFQ7M4L6 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 OR52B1P-201ENST00000316506 909 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 RNU6-582P-201ENST00000362989 107 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 RNA5SP455-201ENST00000365190 119 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 RNU6-1151P-201ENST00000384684 107 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 ARL4AP5-201ENST00000404372 599 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC009237.10-201ENST00000414112 510 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 RPS26P40-201ENST00000435209 294 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 PPIAP17-201ENST00000438507 471 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 MTND5P2-201ENST00000442927 1142 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 AL163193.1-201ENST00000444895 788 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 MTCO2P25-201ENST00000447065 681 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 RPL10P17-201ENST00000453852 316 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC104689.1-201ENST00000473356 768 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHFQ7M4L6 RN7SL30P-201ENST00000488416 306 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 RN7SL558P-201ENST00000497468 299 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC079395.1-201ENST00000510981 262 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 RNU6-1225P-201ENST00000516336 65 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 RNA5SP392-201ENST00000516905 112 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 MTCO1P47-201ENST00000523889 1271 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHFQ7M4L6 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHFQ7M4L6 MTCYBP27-201ENST00000555160 670 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC080013.6-201ENST00000606185 215 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC010424.2-201ENST00000607594 443 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC131235.4-201ENST00000609288 620 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHFQ7M4L6 AL627230.1-201ENST00000613077 211 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 AL591926.8-201ENST00000616876 211 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 AL359757.1-201ENST00000623176 255 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC124312.6-202ENST00000623624 418 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 AL512506.2-201ENST00000624472 458 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC068620.4-201ENST00000636730 1182 ntBASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 AC092162.3-201ENST00000624511 1624 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms