Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 AC106734.1-201ENST00000568646 663 ntBASIC2.86□□□□□ -1.95
VPS13CQ709C8 AC002069.2-201ENST00000603580 883 ntBASIC2.86□□□□□ -1.95
VPS13CQ709C8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 AC093849.1-201ENST00000563631 2209 ntBASIC2.86□□□□□ -1.95
VPS13CQ709C8 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS13CQ709C8 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS13CQ709C8 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS13CQ709C8 U3.39-201ENST00000408569 239 ntBASIC2.86□□□□□ -1.95
VPS13CQ709C8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 AC063979.1-201ENST00000415539 377 ntBASIC2.86□□□□□ -1.95
VPS13CQ709C8 RPF2P1-201ENST00000424137 906 ntBASIC2.86□□□□□ -1.95
VPS13CQ709C8 AC108734.1-201ENST00000439549 399 ntBASIC2.86□□□□□ -1.95
VPS13CQ709C8 AP002884.2-201ENST00000471647 395 ntBASIC2.86□□□□□ -1.95
VPS13CQ709C8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 AC127502.3-201ENST00000636170 1206 ntBASIC2.86□□□□□ -1.95
VPS13CQ709C8 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS13CQ709C8 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS13CQ709C8 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS13CQ709C8 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS13CQ709C8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS13CQ709C8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS13CQ709C8 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 AC006028.1-201ENST00000438379 402 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 RPL32P28-201ENST00000443577 397 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 HIGD1AP3-201ENST00000515857 278 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 AL133247.2-201ENST00000603236 482 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 AL163642.2-201ENST00000604722 1019 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 IGHV3-29-201ENST00000604817 344 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 AC128687.2-201ENST00000609657 566 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VPS13CQ709C8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VPS13CQ709C8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 AC104623.2-202ENST00000623477 4002 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VPS13CQ709C8 DDX6P1-205ENST00000441966 1436 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 MAPK10-320ENST00000641462 6696 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VPS13CQ709C8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VPS13CQ709C8 LIPT1P1-201ENST00000415870 1186 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 AC069285.2-201ENST00000440210 275 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 AC009852.2-201ENST00000567898 485 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 AC103881.1-201ENST00000603476 538 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 AC105227.2-201ENST00000615075 605 ntBASIC2.85□□□□□ -1.95
VPS13CQ709C8 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
VPS13CQ709C8 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
VPS13CQ709C8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VPS13CQ709C8 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VPS13CQ709C8 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
VPS13CQ709C8 MIR422A-201ENST00000362286 90 ntBASIC2.84□□□□□ -1.95
VPS13CQ709C8 SNORA48.8-201ENST00000391324 134 ntBASIC2.84□□□□□ -1.95
VPS13CQ709C8 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS13CQ709C8 AC098824.1-201ENST00000453565 980 ntBASIC2.84□□□□□ -1.95
VPS13CQ709C8 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS13CQ709C8 RPS20P32-201ENST00000456044 356 ntBASIC2.84□□□□□ -1.95
VPS13CQ709C8 DEFB109F-201ENST00000491870 277 ntBASIC2.84□□□□□ -1.95
VPS13CQ709C8 AC026784.1-201ENST00000507986 352 ntBASIC2.84□□□□□ -1.95
VPS13CQ709C8 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS13CQ709C8 AC124312.4-201ENST00000605533 310 ntBASIC2.84□□□□□ -1.95
VPS13CQ709C8 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC2.84□□□□□ -1.95
VPS13CQ709C8 HSPA8P19-201ENST00000505359 1517 ntBASIC2.84□□□□□ -1.95
VPS13CQ709C8 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.84□□□□□ -1.95
VPS13CQ709C8 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
VPS13CQ709C8 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VPS13CQ709C8 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS13CQ709C8 AL353705.1-201ENST00000433468 480 ntBASIC2.84□□□□□ -1.95
VPS13CQ709C8 ATP5HP2-201ENST00000433885 485 ntBASIC2.84□□□□□ -1.95
VPS13CQ709C8 AC087276.1-201ENST00000529659 480 ntBASIC2.84□□□□□ -1.95
VPS13CQ709C8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VPS13CQ709C8 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.84□□□□□ -1.95
VPS13CQ709C8 AC069209.1-201ENST00000619282 651 ntBASIC2.84□□□□□ -1.95
VPS13CQ709C8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC2.84□□□□□ -1.95
VPS13CQ709C8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VPS13CQ709C8 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VPS13CQ709C8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VPS13CQ709C8 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
VPS13CQ709C8 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
VPS13CQ709C8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
VPS13CQ709C8 GNG5P1-201ENST00000255500 204 ntBASIC2.84□□□□□ -1.96
VPS13CQ709C8 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms