Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC104118.1-201ENST00000607625 1589 ntBASIC4.98□□□□□ -1.61
RNF220Q5VTB9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF220Q5VTB9 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 RNU1-19P-201ENST00000363306 165 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 RNA5SP223-201ENST00000365174 120 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 SDHDP6-201ENST00000414693 480 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 Z93019.1-201ENST00000416450 973 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC124944.2-201ENST00000429866 1242 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC002504.1-201ENST00000438281 691 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC073587.1-201ENST00000447093 876 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 IFNWP4-201ENST00000453148 294 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC092754.1-201ENST00000472975 479 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 HMGN2P25-201ENST00000486956 268 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 RNF138P1-201ENST00000502765 546 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC005178.1-201ENST00000508392 440 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 SNORD46.2-201ENST00000516021 102 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC239860.2-201ENST00000525886 270 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 DEFB131D-201ENST00000526803 184 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC008083.4-201ENST00000615076 444 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC009090.3-201ENST00000616553 565 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AC079228.1-201ENST00000624774 1049 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AP003400.3-201ENST00000624904 346 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 MIR1910-201ENST00000636955 80 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 FP325313.1-201ENST00000638228 703 ntBASIC4.97□□□□□ -1.61
RNF220Q5VTB9 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF220Q5VTB9 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
RNF220Q5VTB9 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
RNF220Q5VTB9 AL672167.1-203ENST00000641299 2975 ntBASIC4.96□□□□□ -1.61
RNF220Q5VTB9 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 SNORA51.6-201ENST00000384151 125 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 Y_RNA.560-201ENST00000384689 102 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 RPS24P12-201ENST00000402084 394 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AL031577.2-201ENST00000404133 280 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 RN7SKP247-201ENST00000411094 308 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AC073136.2-201ENST00000417282 849 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AL953862.1-201ENST00000423016 168 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 OR4F13P-201ENST00000428478 931 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AC008065.1-201ENST00000428525 348 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 MTND6P18-201ENST00000439477 513 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 RPL7L1P1-201ENST00000448259 785 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 MTCO3P16-201ENST00000454456 754 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 CYCSP34-201ENST00000458172 304 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AC072039.1-201ENST00000477611 581 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 MTATP6P1-201ENST00000514057 681 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 SCARNA16.4-201ENST00000516956 187 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms