Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 MAPK10-253ENST00000641010 4072 ntBASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 RN7SKP97-201ENST00000410966 333 ntBASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 BX842559.1-201ENST00000419615 532 ntBASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 VN1R25P-201ENST00000443385 738 ntBASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 NANOGNBP1-201ENST00000448444 480 ntBASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 PTGES3P3-201ENST00000511479 482 ntBASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 AC090877.1-201ENST00000561418 344 ntBASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNAPC4Q5SXM2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 OR1AA1P-201ENST00000419597 916 ntBASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 AC025750.2-201ENST00000442609 450 ntBASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 AC017037.1-201ENST00000508460 471 ntBASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 UBE2NP1-201ENST00000545592 458 ntBASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 AC034105.3-201ENST00000565294 442 ntBASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 AC006504.3-201ENST00000586818 523 ntBASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 AL157762.1-201ENST00000619612 415 ntBASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 USP8P1-201ENST00000494673 3183 ntBASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNAPC4Q5SXM2 AC083843.2-201ENST00000568248 6253 ntBASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 SRP72P2-201ENST00000344851 1979 ntBASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 UBE2V1P2-201ENST00000397758 440 ntBASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 MTND6P32-201ENST00000457611 483 ntBASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 RPL27AP5-201ENST00000469428 449 ntBASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 AC026422.1-201ENST00000623961 452 ntBASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 AL022322.2-201ENST00000624072 20397 ntBASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 UBE3AP2-201ENST00000429033 2259 ntBASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
SNAPC4Q5SXM2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 VN1R40P-201ENST00000455196 941 ntBASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 AC010486.1-201ENST00000511793 424 ntBASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 AC006023.1-201ENST00000603944 259 ntBASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 U4.6-201ENST00000621618 127 ntBASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SNAPC4Q5SXM2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 GSTA8P-201ENST00000404253 637 ntBASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 AL160175.1-201ENST00000428124 247 ntBASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNAPC4Q5SXM2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms