Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH1Q08174 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH1Q08174 HIGD1AP16-201ENST00000450986 258 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 PRPF38AP1-201ENST00000451976 933 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 HMGB1P4-201ENST00000455362 567 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 AC073594.1-201ENST00000462065 364 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 RN7SL39P-201ENST00000462264 297 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH1Q08174 AC093815.1-201ENST00000508637 280 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 PCBP2P3-201ENST00000509726 843 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH1Q08174 RNA5SP206-201ENST00000516703 121 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDH1Q08174 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.99□□□□□ -1.45
PCDH1Q08174 AC023050.3-201ENST00000541142 333 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 AC123904.2-201ENST00000548059 300 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH1Q08174 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH1Q08174 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH1Q08174 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.99□□□□□ -1.45
PCDH1Q08174 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH1Q08174 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDH1Q08174 Z98200.1-201ENST00000607298 470 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 AC015819.1-201ENST00000613588 663 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 AC233309.1-201ENST00000619522 751 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDH1Q08174 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH1Q08174 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH1Q08174 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PCDH1Q08174 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDH1Q08174 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PCDH1Q08174 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH1Q08174 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH1Q08174 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH1Q08174 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH1Q08174 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PCDH1Q08174 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH1Q08174 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH1Q08174 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PCDH1Q08174 AC024651.2-201ENST00000562480 2098 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH1Q08174 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH1Q08174 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH1Q08174 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH1Q08174 CDC27P2-201ENST00000425026 1922 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 TRIM51GP-201ENST00000534741 1350 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH1Q08174 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH1Q08174 AC005294.1-201ENST00000355509 281 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 RNA5SP346-201ENST00000363541 121 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 RNU6-744P-201ENST00000365557 107 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDH1Q08174 RNU6-1316P-201ENST00000384242 108 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDH1Q08174 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDH1Q08174 NCOR1P3-201ENST00000420479 303 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 ATP5JP1-201ENST00000431631 322 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDH1Q08174 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDH1Q08174 MTND6P18-201ENST00000439477 513 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDH1Q08174 YRDCP3-201ENST00000456507 480 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 MTCO3P2-201ENST00000457365 171 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDH1Q08174 AC104563.1-201ENST00000476147 376 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 RPL7P42-201ENST00000481005 679 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AP001025.2-201ENST00000490908 477 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AC034222.1-201ENST00000494052 532 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 RPS4XP18-201ENST00000495480 763 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 IGBP1P4-201ENST00000503202 879 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 SUMO2P4-201ENST00000504193 276 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AC092349.1-201ENST00000504903 310 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AC010587.1-201ENST00000505809 469 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDH1Q08174 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDH1Q08174 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDH1Q08174 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDH1Q08174 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDH1Q08174 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDH1Q08174 AC022861.1-201ENST00000522981 663 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AP005597.4-201ENST00000526762 229 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDH1Q08174 AC087241.2-201ENST00000535801 324 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AC079075.1-201ENST00000559543 878 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDH1Q08174 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDH1Q08174 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDH1Q08174 AC115085.1-201ENST00000588924 229 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDH1Q08174 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDH1Q08174 AC121334.2-201ENST00000605387 271 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AC093838.1-201ENST00000613014 469 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AC241377.1-201ENST00000619797 406 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 AL137067.2-201ENST00000621202 131 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 MTND5P42-201ENST00000637720 498 ntBASIC5.98□□□□□ -1.45
PCDH1Q08174 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH1Q08174 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PCDH1Q08174 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
PCDH1Q08174 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms