Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC023632.1-201ENST00000518463 375 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 IFITM8P-201ENST00000522529 394 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SCN1BQ07699 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.13□□□□□ -1.75
SCN1BQ07699 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.13□□□□□ -1.75
SCN1BQ07699 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.13□□□□□ -1.75
SCN1BQ07699 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.13□□□□□ -1.75
SCN1BQ07699 AC044913.1-201ENST00000557200 430 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 CYP4A43P-201ENST00000568156 121 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 TMF1P1-201ENST00000576058 373 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.13□□□□□ -1.75
SCN1BQ07699 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.13□□□□□ -1.75
SCN1BQ07699 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.13□□□□□ -1.75
SCN1BQ07699 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.13□□□□□ -1.75
SCN1BQ07699 RNU6-1192P-201ENST00000612197 107 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 AC022467.1-201ENST00000614738 749 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 MIR6729-201ENST00000618194 65 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 RNU6-489P-201ENST00000618289 107 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 AC098679.5-201ENST00000624394 571 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.13□□□□□ -1.75
SCN1BQ07699 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SCN1BQ07699 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCN1BQ07699 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.13□□□□□ -1.75
SCN1BQ07699 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCN1BQ07699 AC025031.4-201ENST00000621248 3271 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SCN1BQ07699 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SCN1BQ07699 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN1BQ07699 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
SCN1BQ07699 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN1BQ07699 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.12□□□□□ -1.75
SCN1BQ07699 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN1BQ07699 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN1BQ07699 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN1BQ07699 RNU6-374P-201ENST00000364146 108 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 RNA5SP428-201ENST00000365129 132 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN1BQ07699 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SCN1BQ07699 TMSB4XP8-201ENST00000402089 135 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 RPL31P2-201ENST00000413849 377 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 TMSB4XP6-201ENST00000415187 135 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.12□□□□□ -1.75
SCN1BQ07699 RPS12P5-201ENST00000423449 371 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 TMSB4XP1-201ENST00000424567 135 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.12□□□□□ -1.75
SCN1BQ07699 CEACAMP9-201ENST00000442990 513 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN1BQ07699 AP000873.1-201ENST00000463987 400 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 AC090114.3-201ENST00000479267 829 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 GAPDHP39-201ENST00000481866 979 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.12□□□□□ -1.75
SCN1BQ07699 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SCN1BQ07699 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCN1BQ07699 RNA5SP135-201ENST00000517019 125 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.12□□□□□ -1.75
SCN1BQ07699 IGLV2-28-201ENST00000520681 304 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 AC104417.1-201ENST00000523974 751 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 AC022832.1-201ENST00000530718 645 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.12□□□□□ -1.75
SCN1BQ07699 AC092470.1-201ENST00000546187 132 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 AC087897.1-201ENST00000550134 156 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.12□□□□□ -1.75
SCN1BQ07699 FKBP1BP1-201ENST00000553366 325 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.12□□□□□ -1.75
SCN1BQ07699 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.12□□□□□ -1.75
SCN1BQ07699 AC122134.1-202ENST00000569111 1201 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 MIR4666A-201ENST00000580160 79 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCN1BQ07699 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.12□□□□□ -1.75
SCN1BQ07699 AC018645.2-201ENST00000609151 472 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 AC093799.2-201ENST00000610062 578 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 AL591926.8-201ENST00000616876 211 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 MIR6826-201ENST00000617808 98 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 AC103858.2-201ENST00000621471 543 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.12□□□□□ -1.75
SCN1BQ07699 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN1BQ07699 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN1BQ07699 OR11H5P-202ENST00000641612 1325 ntBASIC4.12□□□□□ -1.75
SCN1BQ07699 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN1BQ07699 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.12□□□□□ -1.75
SCN1BQ07699 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SCN1BQ07699 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN1BQ07699 AC008758.3-201ENST00000507003 1829 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.11□□□□□ -1.75
SCN1BQ07699 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.11□□□□□ -1.75
SCN1BQ07699 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.11□□□□□ -1.75
SCN1BQ07699 AL359893.1-201ENST00000447628 1580 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.11□□□□□ -1.75
SCN1BQ07699 AC117529.2-201ENST00000512159 2068 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN1BQ07699 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCN1BQ07699 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
SCN1BQ07699 RNU6-582P-201ENST00000362989 107 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 RNU6-839P-201ENST00000363347 108 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 RNU6-115P-201ENST00000364310 107 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 RNU6-1257P-201ENST00000384625 110 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 MIR649-201ENST00000384843 97 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 ARL4AP5-201ENST00000404372 599 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms