Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 MFSD8-216ENST00000641147 4009 ntBASIC4.43□□□□□ -1.7
LTBQ06643 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LTBQ06643 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LTBQ06643 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LTBQ06643 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.43□□□□□ -1.7
LTBQ06643 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LTBQ06643 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.42□□□□□ -1.7
LTBQ06643 AL121950.1-201ENST00000624993 2077 ntBASIC4.42□□□□□ -1.7
LTBQ06643 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LTBQ06643 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LTBQ06643 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.42□□□□□ -1.7
LTBQ06643 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.42□□□□□ -1.7
LTBQ06643 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
LTBQ06643 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LTBQ06643 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LTBQ06643 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LTBQ06643 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LTBQ06643 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LTBQ06643 Y_RNA.194-201ENST00000363985 102 ntBASIC4.42□□□□□ -1.7
LTBQ06643 RNU1-85P-201ENST00000364127 164 ntBASIC4.42□□□□□ -1.7
LTBQ06643 RNU6-192P-201ENST00000391253 100 ntBASIC4.42□□□□□ -1.7
LTBQ06643 RPL23AP59-201ENST00000399415 461 ntBASIC4.42□□□□□ -1.7
LTBQ06643 HMGB3P18-201ENST00000406327 590 ntBASIC4.42□□□□□ -1.7
LTBQ06643 RNU6-648P-201ENST00000410190 107 ntBASIC4.42□□□□□ -1.7
LTBQ06643 RNA5SP345-201ENST00000410646 108 ntBASIC4.42□□□□□ -1.7
LTBQ06643 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.42□□□□□ -1.7
LTBQ06643 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LTBQ06643 TBCAP2-201ENST00000416175 326 ntBASIC4.42□□□□□ -1.7
LTBQ06643 AC027644.1-201ENST00000419595 298 ntBASIC4.42□□□□□ -1.7
LTBQ06643 GNG5P5-201ENST00000420444 220 ntBASIC4.42□□□□□ -1.7
LTBQ06643 RGS17P1-201ENST00000423358 553 ntBASIC4.42□□□□□ -1.7
LTBQ06643 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LTBQ06643 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.42□□□□□ -1.7
LTBQ06643 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.42□□□□□ -1.7
LTBQ06643 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.42□□□□□ -1.7
LTBQ06643 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.42□□□□□ -1.7
LTBQ06643 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LTBQ06643 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.42□□□□□ -1.7
LTBQ06643 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.42□□□□□ -1.7
LTBQ06643 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.42□□□□□ -1.7
LTBQ06643 ANKRD26P4-201ENST00000455755 950 ntBASIC4.42□□□□□ -1.7
LTBQ06643 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.42□□□□□ -1.7
LTBQ06643 HSPE1P22-201ENST00000456856 327 ntBASIC4.42□□□□□ -1.7
LTBQ06643 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
LTBQ06643 AC112206.1-201ENST00000468416 477 ntBASIC4.42□□□□□ -1.7
LTBQ06643 BZW1P2-201ENST00000473537 826 ntBASIC4.42□□□□□ -1.7
LTBQ06643 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.42□□□□□ -1.7
LTBQ06643 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.42□□□□□ -1.7
LTBQ06643 AC091860.1-201ENST00000505723 432 ntBASIC4.42□□□□□ -1.7
LTBQ06643 AC026402.1-201ENST00000513642 170 ntBASIC4.42□□□□□ -1.7
LTBQ06643 OR5AK3P-201ENST00000527486 1297 ntBASIC4.42□□□□□ -1.7
LTBQ06643 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.42□□□□□ -1.7
LTBQ06643 ELOCP32-201ENST00000548625 324 ntBASIC4.42□□□□□ -1.7
LTBQ06643 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.42□□□□□ -1.7
LTBQ06643 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.42□□□□□ -1.7
LTBQ06643 NBEAP1-201ENST00000554452 979 ntBASIC4.42□□□□□ -1.7
LTBQ06643 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.42□□□□□ -1.7
LTBQ06643 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.42□□□□□ -1.7
LTBQ06643 CYP2C60P-201ENST00000566088 139 ntBASIC4.42□□□□□ -1.7
LTBQ06643 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.42□□□□□ -1.7
LTBQ06643 AC012213.3-201ENST00000577199 777 ntBASIC4.42□□□□□ -1.7
LTBQ06643 MIR4675-201ENST00000577898 77 ntBASIC4.42□□□□□ -1.7
LTBQ06643 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.42□□□□□ -1.7
LTBQ06643 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.42□□□□□ -1.7
LTBQ06643 AP001981.2-201ENST00000603241 418 ntBASIC4.42□□□□□ -1.7
LTBQ06643 AC004987.4-201ENST00000603383 338 ntBASIC4.42□□□□□ -1.7
LTBQ06643 AC106791.2-201ENST00000604680 391 ntBASIC4.42□□□□□ -1.7
LTBQ06643 AL590392.1-201ENST00000604960 446 ntBASIC4.42□□□□□ -1.7
LTBQ06643 MIR92B-201ENST00000607575 96 ntBASIC4.42□□□□□ -1.7
LTBQ06643 AC072039.2-201ENST00000608883 439 ntBASIC4.42□□□□□ -1.7
LTBQ06643 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.42□□□□□ -1.7
LTBQ06643 Z69908.1-201ENST00000622603 247 ntBASIC4.42□□□□□ -1.7
LTBQ06643 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.42□□□□□ -1.7
LTBQ06643 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.42□□□□□ -1.7
LTBQ06643 ZNF663P-202ENST00000641770 1131 ntBASIC4.42□□□□□ -1.7
LTBQ06643 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.42□□□□□ -1.7
LTBQ06643 SDAD1P1-202ENST00000524156 2051 ntBASIC4.42□□□□□ -1.7
LTBQ06643 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LTBQ06643 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LTBQ06643 AC008758.3-201ENST00000507003 1829 ntBASIC4.42□□□□□ -1.7
LTBQ06643 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.42□□□□□ -1.7
LTBQ06643 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.41□□□□□ -1.7
LTBQ06643 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LTBQ06643 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LTBQ06643 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LTBQ06643 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LTBQ06643 SGO1P2-201ENST00000429458 1589 ntBASIC4.41□□□□□ -1.7
LTBQ06643 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LTBQ06643 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.41□□□□□ -1.7
LTBQ06643 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
LTBQ06643 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LTBQ06643 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LTBQ06643 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LTBQ06643 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LTBQ06643 NACA3P-201ENST00000359690 648 ntBASIC4.41□□□□□ -1.7
LTBQ06643 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.41□□□□□ -1.7
LTBQ06643 Y_RNA.619-201ENST00000410951 90 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.41□□□□□ -1.7
LTBQ06643 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.41□□□□□ -1.7
LTBQ06643 AL590806.1-201ENST00000415818 853 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms