Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
GABPAQ06546 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.6□□□□□ -1.67
GABPAQ06546 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GABPAQ06546 RNU1-108P-201ENST00000362556 161 ntBASIC4.6□□□□□ -1.67
GABPAQ06546 MIR1251-201ENST00000408552 70 ntBASIC4.6□□□□□ -1.67
GABPAQ06546 RPL7AP73-201ENST00000413490 353 ntBASIC4.6□□□□□ -1.67
GABPAQ06546 MTATP6P11-201ENST00000428071 670 ntBASIC4.6□□□□□ -1.67
GABPAQ06546 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.6□□□□□ -1.67
GABPAQ06546 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.6□□□□□ -1.67
GABPAQ06546 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
GABPAQ06546 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.6□□□□□ -1.67
GABPAQ06546 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.6□□□□□ -1.67
GABPAQ06546 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.6□□□□□ -1.67
GABPAQ06546 AL035551.1-201ENST00000446931 348 ntBASIC4.6□□□□□ -1.67
GABPAQ06546 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.6□□□□□ -1.67
GABPAQ06546 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.6□□□□□ -1.67
GABPAQ06546 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.6□□□□□ -1.67
GABPAQ06546 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.6□□□□□ -1.67
GABPAQ06546 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.6□□□□□ -1.67
GABPAQ06546 NDUFB4P12-201ENST00000513465 390 ntBASIC4.6□□□□□ -1.67
GABPAQ06546 TRMT10BP1-201ENST00000519377 943 ntBASIC4.6□□□□□ -1.67
GABPAQ06546 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.6□□□□□ -1.67
GABPAQ06546 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.6□□□□□ -1.67
GABPAQ06546 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.6□□□□□ -1.67
GABPAQ06546 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.6□□□□□ -1.67
GABPAQ06546 GLRXP2-201ENST00000555594 321 ntBASIC4.6□□□□□ -1.67
GABPAQ06546 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.6□□□□□ -1.67
GABPAQ06546 MIR92B-201ENST00000607575 96 ntBASIC4.6□□□□□ -1.67
GABPAQ06546 AC026368.1-201ENST00000614934 690 ntBASIC4.6□□□□□ -1.67
GABPAQ06546 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
GABPAQ06546 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
GABPAQ06546 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
GABPAQ06546 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
GABPAQ06546 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GABPAQ06546 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
GABPAQ06546 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
GABPAQ06546 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GABPAQ06546 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
GABPAQ06546 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
GABPAQ06546 SNORA62.3-201ENST00000365110 153 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.59□□□□□ -1.67
GABPAQ06546 RNA5SP146-201ENST00000410743 123 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.59□□□□□ -1.67
GABPAQ06546 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.59□□□□□ -1.67
GABPAQ06546 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.59□□□□□ -1.67
GABPAQ06546 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.59□□□□□ -1.67
GABPAQ06546 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.59□□□□□ -1.67
GABPAQ06546 RPL37P1-201ENST00000432310 284 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.59□□□□□ -1.67
GABPAQ06546 MTND2P2-201ENST00000434633 945 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 MTND4P15-201ENST00000437913 1033 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.59□□□□□ -1.67
GABPAQ06546 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.59□□□□□ -1.67
GABPAQ06546 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.59□□□□□ -1.67
GABPAQ06546 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.59□□□□□ -1.67
GABPAQ06546 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GABPAQ06546 AC022795.1-201ENST00000473808 480 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 ACTR3P3-201ENST00000480448 893 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 AC093663.2-201ENST00000484625 313 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 RPL7P24-201ENST00000493052 752 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GABPAQ06546 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GABPAQ06546 HMGB1P19-201ENST00000517578 577 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.59□□□□□ -1.67
GABPAQ06546 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.59□□□□□ -1.67
GABPAQ06546 OR8K2P-201ENST00000524645 927 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GABPAQ06546 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
GABPAQ06546 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
GABPAQ06546 NPM1P47-201ENST00000560843 856 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 CD24P2-201ENST00000565486 219 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 AC053481.3-201ENST00000577881 843 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.59□□□□□ -1.67
GABPAQ06546 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.59□□□□□ -1.67
GABPAQ06546 AL008729.2-201ENST00000606393 473 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 AC020923.1-201ENST00000624021 917 ntBASIC4.59□□□□□ -1.67
GABPAQ06546 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
GABPAQ06546 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
GABPAQ06546 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
GABPAQ06546 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GABPAQ06546 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
GABPAQ06546 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GABPAQ06546 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GABPAQ06546 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
GABPAQ06546 SNORA71.3-201ENST00000362582 128 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 RNA5SP97-201ENST00000365006 84 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.58□□□□□ -1.68
GABPAQ06546 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.58□□□□□ -1.68
GABPAQ06546 RNU6-532P-201ENST00000384318 107 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 RNU6-244P-201ENST00000391028 104 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 SNORA68.2-201ENST00000391263 128 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 AL590704.1-201ENST00000402856 794 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 AC073464.3-201ENST00000422564 712 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.58□□□□□ -1.68
GABPAQ06546 TMX2P1-201ENST00000436507 708 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 HMGB1P37-201ENST00000439613 609 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 AC023512.1-201ENST00000444513 499 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.58□□□□□ -1.68
GABPAQ06546 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.58□□□□□ -1.68
GABPAQ06546 AL133162.1-201ENST00000463228 453 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms