Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 AL358472.1-201ENST00000431295 329 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 MTCYBP31-201ENST00000438855 1122 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 AC092809.1-201ENST00000441469 474 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 TXNP1-201ENST00000441872 371 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 DNAJC19P1-201ENST00000455312 319 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 HMGB3P30-201ENST00000457863 606 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 AC092691.2-201ENST00000461787 803 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 AC093331.1-201ENST00000521474 169 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 OR7E10P-201ENST00000526420 991 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 MIR5096-201ENST00000583713 70 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 AC068790.4-201ENST00000602474 263 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 AC034236.3-201ENST00000605999 461 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 MIR6820-201ENST00000611508 62 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 AC114781.5-201ENST00000615297 108 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 MIR3653-201ENST00000625572 110 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AC005183.1-201ENST00000603687 1979 ntBASIC3.01□□□□□ -1.93
HIST1H1AQ02539 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AC138915.3-201ENST00000562908 1389 ntBASIC3.01□□□□□ -1.93
HIST1H1AQ02539 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 MIR184-201ENST00000384962 84 ntBASIC3.01□□□□□ -1.93
HIST1H1AQ02539 RNU11-4P-201ENST00000391149 133 ntBASIC3.01□□□□□ -1.93
HIST1H1AQ02539 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 RAB9AP4-201ENST00000415230 609 ntBASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 HIGD1AP4-201ENST00000430194 280 ntBASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AC005912.1-201ENST00000495392 255 ntBASIC3.01□□□□□ -1.93
HIST1H1AQ02539 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AC025260.1-201ENST00000548858 430 ntBASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AC067852.4-201ENST00000590314 478 ntBASIC3.01□□□□□ -1.93
HIST1H1AQ02539 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AC104785.1-201ENST00000603220 588 ntBASIC3.01□□□□□ -1.93
HIST1H1AQ02539 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 MIR8058-201ENST00000615737 89 ntBASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AC124312.6-202ENST00000623624 418 ntBASIC3.01□□□□□ -1.93
HIST1H1AQ02539 MIR4278-201ENST00000636094 69 ntBASIC3.01□□□□□ -1.93
HIST1H1AQ02539 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 CEP170P1-201ENST00000502249 4587 ntBASIC3.01□□□□□ -1.93
HIST1H1AQ02539 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HIST1H1AQ02539 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3□□□□□ -1.93
HIST1H1AQ02539 MFSD8-236ENST00000641509 4050 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3□□□□□ -1.93
HIST1H1AQ02539 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HIST1H1AQ02539 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HIST1H1AQ02539 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3□□□□□ -1.93
HIST1H1AQ02539 AL592494.2-201ENST00000425455 1548 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
HIST1H1AQ02539 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3□□□□□ -1.93
HIST1H1AQ02539 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
HIST1H1AQ02539 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
HIST1H1AQ02539 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3□□□□□ -1.93
HIST1H1AQ02539 ATP5F1P4-201ENST00000397288 746 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
HIST1H1AQ02539 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms