Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SMCR2_2.1-201ENST00000619783 161 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC2.2□□□□□ -2.06
HSPG2P98160 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HSPG2P98160 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC2.2□□□□□ -2.06
HSPG2P98160 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.2□□□□□ -2.06
HSPG2P98160 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.2□□□□□ -2.06
HSPG2P98160 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HSPG2P98160 RNA5SP424-201ENST00000390988 115 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 AL353705.1-201ENST00000433468 480 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.2□□□□□ -2.06
HSPG2P98160 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.2□□□□□ -2.06
HSPG2P98160 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.2□□□□□ -2.06
HSPG2P98160 MIR4276-201ENST00000584832 70 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 AC087241.4-201ENST00000612441 480 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC2.2□□□□□ -2.06
HSPG2P98160 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
HSPG2P98160 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC2.2□□□□□ -2.06
HSPG2P98160 ASNSP3-201ENST00000451989 1306 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HSPG2P98160 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.2□□□□□ -2.06
HSPG2P98160 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
HSPG2P98160 SNORA54-201ENST00000384281 123 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 HSPE1P27-201ENST00000430808 296 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 AC104058.1-201ENST00000448028 297 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 AL121594.4-201ENST00000556211 1196 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
HSPG2P98160 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC2.2□□□□□ -2.06
HSPG2P98160 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HSPG2P98160 AL645937.1-201ENST00000641739 1652 ntBASIC2.2□□□□□ -2.06
HSPG2P98160 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
HSPG2P98160 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HSPG2P98160 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.2□□□□□ -2.06
HSPG2P98160 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
HSPG2P98160 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 RNA5SP235-201ENST00000365411 114 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.19□□□□□ -2.06
HSPG2P98160 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.19□□□□□ -2.06
HSPG2P98160 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.19□□□□□ -2.06
HSPG2P98160 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.19□□□□□ -2.06
HSPG2P98160 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC2.19□□□□□ -2.06
HSPG2P98160 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC2.19□□□□□ -2.06
HSPG2P98160 AC008011.1-201ENST00000545989 227 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
HSPG2P98160 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.19□□□□□ -2.06
HSPG2P98160 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC2.19□□□□□ -2.06
HSPG2P98160 AC021755.1-201ENST00000559747 1447 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 RNU4-29P-201ENST00000515943 174 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.19□□□□□ -2.06
HSPG2P98160 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.19□□□□□ -2.06
HSPG2P98160 CKS1BP3-201ENST00000600888 237 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 IGHV3-29-201ENST00000604817 344 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 AC063979.1-201ENST00000415539 377 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.19□□□□□ -2.06
HSPG2P98160 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.19□□□□□ -2.06
HSPG2P98160 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.19□□□□□ -2.06
HSPG2P98160 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.19□□□□□ -2.06
HSPG2P98160 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.19□□□□□ -2.06
HSPG2P98160 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.19□□□□□ -2.06
HSPG2P98160 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 MKKS-203ENST00000609375 882 ntTSL 2 BASIC2.19□□□□□ -2.06
HSPG2P98160 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
HSPG2P98160 BCORP1-203ENST00000513194 5093 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
HSPG2P98160 AC073073.2-201ENST00000609827 2578 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.19□□□□□ -2.06
HSPG2P98160 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HSPG2P98160 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
HSPG2P98160 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 SNORA5B-201ENST00000363786 132 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.19□□□□□ -2.06
HSPG2P98160 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 AC073508.1-201ENST00000428866 656 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.19□□□□□ -2.06
HSPG2P98160 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.19□□□□□ -2.06
HSPG2P98160 TXNP1-201ENST00000441872 371 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HSPG2P98160 AC025554.1-201ENST00000505641 188 ntBASIC2.19□□□□□ -2.06
HSPG2P98160 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.19□□□□□ -2.06
HSPG2P98160 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.19□□□□□ -2.06
HSPG2P98160 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC2.19□□□□□ -2.06
HSPG2P98160 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HSPG2P98160 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HSPG2P98160 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.18□□□□□ -2.06
HSPG2P98160 FAM172BP-201ENST00000487497 1089 ntBASIC2.18□□□□□ -2.06
HSPG2P98160 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC2.18□□□□□ -2.06
HSPG2P98160 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms