Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.66□□□□□ -1.66
RAE1P78406 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.66□□□□□ -1.66
RAE1P78406 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.66□□□□□ -1.66
RAE1P78406 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.66□□□□□ -1.66
RAE1P78406 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.66□□□□□ -1.66
RAE1P78406 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
RAE1P78406 AC090022.1-201ENST00000546569 311 ntBASIC4.66□□□□□ -1.66
RAE1P78406 AC023161.2-201ENST00000551218 780 ntBASIC4.66□□□□□ -1.66
RAE1P78406 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.66□□□□□ -1.66
RAE1P78406 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.66□□□□□ -1.66
RAE1P78406 AC093519.1-201ENST00000566109 298 ntBASIC4.66□□□□□ -1.66
RAE1P78406 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.66□□□□□ -1.66
RAE1P78406 AC138915.2-201ENST00000569776 97 ntBASIC4.66□□□□□ -1.66
RAE1P78406 TVP23CP2-201ENST00000571473 623 ntBASIC4.66□□□□□ -1.66
RAE1P78406 MIR4472-2-201ENST00000582069 67 ntBASIC4.66□□□□□ -1.66
RAE1P78406 AF131215.7-201ENST00000602443 707 ntBASIC4.66□□□□□ -1.66
RAE1P78406 AL355816.1-201ENST00000607951 118 ntBASIC4.66□□□□□ -1.66
RAE1P78406 AC090425.2-201ENST00000608818 501 ntBASIC4.66□□□□□ -1.66
RAE1P78406 AC008083.4-201ENST00000615076 444 ntBASIC4.66□□□□□ -1.66
RAE1P78406 AC019206.1-201ENST00000621938 425 ntBASIC4.66□□□□□ -1.66
RAE1P78406 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.66□□□□□ -1.66
RAE1P78406 AC026634.1-201ENST00000634369 198 ntBASIC4.66□□□□□ -1.66
RAE1P78406 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RAE1P78406 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RAE1P78406 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
RAE1P78406 CDR1-202ENST00000625883 1485 ntBASIC4.66□□□□□ -1.66
RAE1P78406 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.66□□□□□ -1.66
RAE1P78406 CR381670.1-201ENST00000624291 1693 ntBASIC4.66□□□□□ -1.66
RAE1P78406 AC011477.1-204ENST00000623416 1325 ntBASIC4.66□□□□□ -1.66
RAE1P78406 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RAE1P78406 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RAE1P78406 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RAE1P78406 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RAE1P78406 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.66□□□□□ -1.66
RAE1P78406 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.65□□□□□ -1.66
RAE1P78406 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RAE1P78406 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.65□□□□□ -1.66
RAE1P78406 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
RAE1P78406 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RAE1P78406 RNU6-115P-201ENST00000364310 107 ntBASIC4.65□□□□□ -1.67
RAE1P78406 MIR92A2-201ENST00000385299 75 ntBASIC4.65□□□□□ -1.67
RAE1P78406 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.65□□□□□ -1.67
RAE1P78406 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.65□□□□□ -1.67
RAE1P78406 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.65□□□□□ -1.67
RAE1P78406 AC007394.1-201ENST00000421941 531 ntBASIC4.65□□□□□ -1.67
RAE1P78406 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.65□□□□□ -1.67
RAE1P78406 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.65□□□□□ -1.67
RAE1P78406 AC008072.1-201ENST00000434254 824 ntBASIC4.65□□□□□ -1.67
RAE1P78406 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.65□□□□□ -1.67
RAE1P78406 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.65□□□□□ -1.67
RAE1P78406 AC243772.1-201ENST00000451620 410 ntBASIC4.65□□□□□ -1.67
RAE1P78406 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.65□□□□□ -1.67
RAE1P78406 RPL23AP56-201ENST00000460778 453 ntBASIC4.65□□□□□ -1.67
RAE1P78406 RN7SL319P-201ENST00000480656 221 ntBASIC4.65□□□□□ -1.67
RAE1P78406 NCOR1P1-202ENST00000486162 291 ntBASIC4.65□□□□□ -1.67
RAE1P78406 MTCYBP37-201ENST00000510642 1133 ntBASIC4.65□□□□□ -1.67
RAE1P78406 HMGB3P13-201ENST00000511263 607 ntBASIC4.65□□□□□ -1.67
RAE1P78406 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.65□□□□□ -1.67
RAE1P78406 RNA5SP34-201ENST00000516887 130 ntBASIC4.65□□□□□ -1.67
RAE1P78406 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.65□□□□□ -1.67
RAE1P78406 AC027309.2-201ENST00000520566 192 ntBASIC4.65□□□□□ -1.67
RAE1P78406 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.65□□□□□ -1.67
RAE1P78406 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.65□□□□□ -1.67
RAE1P78406 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RAE1P78406 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.65□□□□□ -1.67
RAE1P78406 AL121766.1-201ENST00000547436 487 ntBASIC4.65□□□□□ -1.67
RAE1P78406 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RAE1P78406 AC005951.1-201ENST00000576706 485 ntBASIC4.65□□□□□ -1.67
RAE1P78406 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.65□□□□□ -1.67
RAE1P78406 RN7SL435P-201ENST00000584418 282 ntBASIC4.65□□□□□ -1.67
RAE1P78406 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.65□□□□□ -1.67
RAE1P78406 AP001981.2-201ENST00000603241 418 ntBASIC4.65□□□□□ -1.67
RAE1P78406 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.65□□□□□ -1.67
RAE1P78406 AC073114.1-201ENST00000612027 490 ntBASIC4.65□□□□□ -1.67
RAE1P78406 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.65□□□□□ -1.67
RAE1P78406 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RAE1P78406 DHX9P1-201ENST00000436565 3076 ntBASIC4.65□□□□□ -1.67
RAE1P78406 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.65□□□□□ -1.67
RAE1P78406 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RAE1P78406 AL138820.1-201ENST00000617901 5305 ntBASIC4.65□□□□□ -1.67
RAE1P78406 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
RAE1P78406 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
RAE1P78406 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.65□□□□□ -1.67
RAE1P78406 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RAE1P78406 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.64□□□□□ -1.67
RAE1P78406 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RAE1P78406 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.64□□□□□ -1.67
RAE1P78406 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RAE1P78406 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
RAE1P78406 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.64□□□□□ -1.67
RAE1P78406 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RAE1P78406 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms