Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.38□□□□□ -1.87
UBA52P62987 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.38□□□□□ -1.87
UBA52P62987 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.38□□□□□ -1.87
UBA52P62987 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.38□□□□□ -1.87
UBA52P62987 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.38□□□□□ -1.87
UBA52P62987 AC022146.1-201ENST00000595307 847 ntBASIC3.38□□□□□ -1.87
UBA52P62987 AL606490.9-201ENST00000603331 271 ntBASIC3.38□□□□□ -1.87
UBA52P62987 AC024220.1-201ENST00000603675 484 ntBASIC3.38□□□□□ -1.87
UBA52P62987 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 RIOK3P1-201ENST00000418778 1528 ntBASIC3.38□□□□□ -1.87
UBA52P62987 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBA52P62987 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBA52P62987 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBA52P62987 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.37□□□□□ -1.87
UBA52P62987 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBA52P62987 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBA52P62987 AC007529.1-201ENST00000418574 2178 ntBASIC3.37□□□□□ -1.87
UBA52P62987 SNORA70.4-201ENST00000365509 134 ntBASIC3.37□□□□□ -1.87
UBA52P62987 MIR184-201ENST00000384962 84 ntBASIC3.37□□□□□ -1.87
UBA52P62987 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBA52P62987 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.37□□□□□ -1.87
UBA52P62987 AC002075.2-201ENST00000425207 252 ntBASIC3.37□□□□□ -1.87
UBA52P62987 AC018644.1-201ENST00000429934 551 ntBASIC3.37□□□□□ -1.87
UBA52P62987 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
UBA52P62987 AC083863.1-201ENST00000438811 231 ntBASIC3.37□□□□□ -1.87
UBA52P62987 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.37□□□□□ -1.87
UBA52P62987 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
UBA52P62987 HSPE1P22-201ENST00000456856 327 ntBASIC3.37□□□□□ -1.87
UBA52P62987 AC099560.2-201ENST00000457554 255 ntBASIC3.37□□□□□ -1.87
UBA52P62987 RNU7-170P-201ENST00000459303 61 ntBASIC3.37□□□□□ -1.87
UBA52P62987 AC091564.1-201ENST00000464563 479 ntBASIC3.37□□□□□ -1.87
UBA52P62987 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.37□□□□□ -1.87
UBA52P62987 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.37□□□□□ -1.87
UBA52P62987 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.37□□□□□ -1.87
UBA52P62987 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.37□□□□□ -1.87
UBA52P62987 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UBA52P62987 SNORA70.14-201ENST00000516205 110 ntBASIC3.37□□□□□ -1.87
UBA52P62987 OR7E10P-201ENST00000526420 991 ntBASIC3.37□□□□□ -1.87
UBA52P62987 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UBA52P62987 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.37□□□□□ -1.87
UBA52P62987 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.37□□□□□ -1.87
UBA52P62987 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.37□□□□□ -1.87
UBA52P62987 AL121576.1-201ENST00000556055 276 ntBASIC3.37□□□□□ -1.87
UBA52P62987 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.37□□□□□ -1.87
UBA52P62987 HNRNPCP4-201ENST00000571636 900 ntBASIC3.37□□□□□ -1.87
UBA52P62987 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.37□□□□□ -1.87
UBA52P62987 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.37□□□□□ -1.87
UBA52P62987 AC008739.3-201ENST00000603262 127 ntBASIC3.37□□□□□ -1.87
UBA52P62987 QTRT1P1-201ENST00000604344 1078 ntBASIC3.37□□□□□ -1.87
UBA52P62987 AC023813.4-201ENST00000607580 580 ntBASIC3.37□□□□□ -1.87
UBA52P62987 AC017076.1-201ENST00000607613 578 ntBASIC3.37□□□□□ -1.87
UBA52P62987 AL591424.2-201ENST00000617023 128 ntBASIC3.37□□□□□ -1.87
UBA52P62987 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
UBA52P62987 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBA52P62987 AL049555.1-201ENST00000562834 1933 ntBASIC3.36□□□□□ -1.87
UBA52P62987 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBA52P62987 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UBA52P62987 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBA52P62987 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
UBA52P62987 AC006042.3-201ENST00000454684 1469 ntBASIC3.36□□□□□ -1.87
UBA52P62987 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UBA52P62987 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
UBA52P62987 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.36□□□□□ -1.87
UBA52P62987 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.36□□□□□ -1.87
UBA52P62987 AC007685.1-201ENST00000329806 452 ntBASIC3.36□□□□□ -1.87
UBA52P62987 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
UBA52P62987 HSPE1P8-201ENST00000406997 288 ntBASIC3.36□□□□□ -1.87
UBA52P62987 SNORA11.1-201ENST00000408133 129 ntBASIC3.36□□□□□ -1.87
UBA52P62987 TCEA1P4-201ENST00000415066 844 ntBASIC3.36□□□□□ -1.87
UBA52P62987 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.36□□□□□ -1.87
UBA52P62987 RPL21P109-201ENST00000422213 475 ntBASIC3.36□□□□□ -1.87
UBA52P62987 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.36□□□□□ -1.87
UBA52P62987 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.36□□□□□ -1.87
UBA52P62987 RPS20P1-201ENST00000434853 354 ntBASIC3.36□□□□□ -1.87
UBA52P62987 AL353597.2-202ENST00000434901 373 ntBASIC3.36□□□□□ -1.87
UBA52P62987 NANOGP10-201ENST00000453325 895 ntBASIC3.36□□□□□ -1.87
UBA52P62987 AL136097.1-201ENST00000456945 913 ntBASIC3.36□□□□□ -1.87
UBA52P62987 RPL36AP13-201ENST00000457490 317 ntBASIC3.36□□□□□ -1.87
UBA52P62987 RNA5SP246-201ENST00000458909 119 ntBASIC3.36□□□□□ -1.87
UBA52P62987 AF213884.1-201ENST00000488102 463 ntBASIC3.36□□□□□ -1.87
UBA52P62987 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.36□□□□□ -1.87
UBA52P62987 ARL2BPP6-201ENST00000512757 439 ntBASIC3.36□□□□□ -1.87
UBA52P62987 RFPL4AP3-201ENST00000515267 345 ntBASIC3.36□□□□□ -1.87
UBA52P62987 RN7SKP83-201ENST00000516512 178 ntBASIC3.36□□□□□ -1.87
UBA52P62987 HSPE1P5-201ENST00000561489 272 ntBASIC3.36□□□□□ -1.87
UBA52P62987 CYP2C60P-201ENST00000566088 139 ntBASIC3.36□□□□□ -1.87
UBA52P62987 AP005901.4-201ENST00000577336 569 ntBASIC3.36□□□□□ -1.87
UBA52P62987 MIR5685-201ENST00000579080 79 ntBASIC3.36□□□□□ -1.87
UBA52P62987 MIR3944-201ENST00000581277 108 ntBASIC3.36□□□□□ -1.87
UBA52P62987 RMST_8.1-201ENST00000610287 165 ntBASIC3.36□□□□□ -1.87
UBA52P62987 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.36□□□□□ -1.87
UBA52P62987 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.36□□□□□ -1.87
UBA52P62987 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.36□□□□□ -1.87
UBA52P62987 CR392039.5-201ENST00000623201 510 ntBASIC3.36□□□□□ -1.87
UBA52P62987 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms