Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM3P62310 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM3P62310 IGKV7-3-201ENST00000357453 298 ntBASIC3.16□□□□□ -1.9
LSM3P62310 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
LSM3P62310 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
LSM3P62310 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LSM3P62310 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM3P62310 ENSAP1-201ENST00000392855 326 ntBASIC3.16□□□□□ -1.9
LSM3P62310 U3.39-201ENST00000408569 239 ntBASIC3.16□□□□□ -1.9
LSM3P62310 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.16□□□□□ -1.9
LSM3P62310 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM3P62310 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM3P62310 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.16□□□□□ -1.9
LSM3P62310 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.16□□□□□ -1.9
LSM3P62310 RPL23AP22-201ENST00000437556 453 ntBASIC3.16□□□□□ -1.9
LSM3P62310 AC010655.1-201ENST00000449336 292 ntBASIC3.16□□□□□ -1.9
LSM3P62310 Z95152.1-201ENST00000453556 656 ntBASIC3.16□□□□□ -1.9
LSM3P62310 RN7SL303P-201ENST00000469773 251 ntBASIC3.16□□□□□ -1.9
LSM3P62310 AC022034.3-201ENST00000471393 478 ntBASIC3.16□□□□□ -1.9
LSM3P62310 AC110792.1-201ENST00000491826 472 ntBASIC3.16□□□□□ -1.9
LSM3P62310 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LSM3P62310 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.16□□□□□ -1.9
LSM3P62310 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM3P62310 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM3P62310 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.16□□□□□ -1.9
LSM3P62310 RNA5SP164-201ENST00000516533 110 ntBASIC3.16□□□□□ -1.9
LSM3P62310 SNORA70.19-201ENST00000516717 90 ntBASIC3.16□□□□□ -1.9
LSM3P62310 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM3P62310 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM3P62310 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM3P62310 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM3P62310 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.16□□□□□ -1.9
LSM3P62310 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM3P62310 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM3P62310 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM3P62310 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM3P62310 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM3P62310 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.16□□□□□ -1.9
LSM3P62310 AL356274.1-201ENST00000617064 410 ntBASIC3.16□□□□□ -1.9
LSM3P62310 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM3P62310 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LSM3P62310 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM3P62310 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM3P62310 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LSM3P62310 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.15□□□□□ -1.9
LSM3P62310 AC005261.4-201ENST00000600047 1385 ntBASIC3.15□□□□□ -1.9
LSM3P62310 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
LSM3P62310 OR10AB1P-202ENST00000641219 1686 ntBASIC3.15□□□□□ -1.9
LSM3P62310 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
LSM3P62310 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LSM3P62310 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LSM3P62310 AC079741.1-201ENST00000321498 212 ntBASIC3.15□□□□□ -1.91
LSM3P62310 RPL7P26-201ENST00000333817 754 ntBASIC3.15□□□□□ -1.91
LSM3P62310 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LSM3P62310 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.15□□□□□ -1.91
LSM3P62310 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LSM3P62310 RN7SKP177-201ENST00000410567 355 ntBASIC3.15□□□□□ -1.91
LSM3P62310 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM3P62310 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.15□□□□□ -1.91
LSM3P62310 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.15□□□□□ -1.91
LSM3P62310 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LSM3P62310 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM3P62310 RPL23AP82-202ENST00000427528 469 ntBASIC3.15□□□□□ -1.91
LSM3P62310 VN1R54P-201ENST00000435210 1049 ntBASIC3.15□□□□□ -1.91
LSM3P62310 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM3P62310 ELOCP10-201ENST00000440624 327 ntBASIC3.15□□□□□ -1.91
LSM3P62310 CENPBD1P1-201ENST00000464061 469 ntBASIC3.15□□□□□ -1.91
LSM3P62310 AC011276.1-201ENST00000469688 323 ntBASIC3.15□□□□□ -1.91
LSM3P62310 AP002884.2-201ENST00000471647 395 ntBASIC3.15□□□□□ -1.91
LSM3P62310 AP000926.1-201ENST00000479573 241 ntBASIC3.15□□□□□ -1.91
LSM3P62310 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.15□□□□□ -1.91
LSM3P62310 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.15□□□□□ -1.91
LSM3P62310 IGKV2-23-201ENST00000518729 323 ntBASIC3.15□□□□□ -1.91
LSM3P62310 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.15□□□□□ -1.91
LSM3P62310 OR4C2P-201ENST00000530855 1064 ntBASIC3.15□□□□□ -1.91
LSM3P62310 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LSM3P62310 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.15□□□□□ -1.91
LSM3P62310 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.15□□□□□ -1.91
LSM3P62310 MIR4715-201ENST00000584117 79 ntBASIC3.15□□□□□ -1.91
LSM3P62310 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM3P62310 ELOCP34-201ENST00000604436 327 ntBASIC3.15□□□□□ -1.91
LSM3P62310 AC114781.5-201ENST00000615297 108 ntBASIC3.15□□□□□ -1.91
LSM3P62310 AC110801.1-201ENST00000623590 212 ntBASIC3.15□□□□□ -1.91
LSM3P62310 MIR3653-201ENST00000625572 110 ntBASIC3.15□□□□□ -1.91
LSM3P62310 AP000553.6-201ENST00000641242 118 ntBASIC3.15□□□□□ -1.91
LSM3P62310 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LSM3P62310 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM3P62310 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LSM3P62310 AL049555.1-201ENST00000562834 1933 ntBASIC3.15□□□□□ -1.91
LSM3P62310 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
LSM3P62310 AP000756.2-201ENST00000624168 2567 ntBASIC3.14□□□□□ -1.91
LSM3P62310 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LSM3P62310 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.14□□□□□ -1.91
LSM3P62310 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSM3P62310 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSM3P62310 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LSM3P62310 RNA5SP130-201ENST00000364431 114 ntBASIC3.14□□□□□ -1.91
LSM3P62310 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSM3P62310 RPS3AP23-201ENST00000401762 784 ntBASIC3.14□□□□□ -1.91
LSM3P62310 RPS16P5-201ENST00000406501 404 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms