Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RN7SL629P-201ENST00000489622 285 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CKS1BP61024 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CKS1BP61024 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC2.84□□□□□ -1.95
CKS1BP61024 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.84□□□□□ -1.95
CKS1BP61024 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CKS1BP61024 AL109766.1-201ENST00000555080 552 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 AC027176.2-201ENST00000559166 746 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 NPM1P47-201ENST00000560843 856 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 MIR3690-201ENST00000580266 75 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 MIR4737-201ENST00000583979 81 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 AC091488.1-201ENST00000604239 660 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 AC004832.5-201ENST00000608677 401 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 AC087385.3-201ENST00000620477 187 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 AC068870.2-201ENST00000620635 389 ntBASIC2.84□□□□□ -1.95
CKS1BP61024 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC2.84□□□□□ -1.95
CKS1BP61024 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
CKS1BP61024 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.96
CKS1BP61024 AC131971.1-201ENST00000332881 1482 ntBASIC2.84□□□□□ -1.96
CKS1BP61024 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.84□□□□□ -1.96
CKS1BP61024 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC2.84□□□□□ -1.96
CKS1BP61024 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CKS1BP61024 AC093908.1-201ENST00000623125 8092 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 PWAR6-201ENST00000552334 4618 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
CKS1BP61024 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CKS1BP61024 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CKS1BP61024 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CKS1BP61024 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CKS1BP61024 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CKS1BP61024 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC2.83□□□□□ -1.96
CKS1BP61024 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
CKS1BP61024 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC2.83□□□□□ -1.96
CKS1BP61024 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CKS1BP61024 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CKS1BP61024 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CKS1BP61024 AP000357.1-201ENST00000409926 1165 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AC004987.3-201ENST00000413879 771 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 EI24P1-201ENST00000416584 867 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AC012498.1-201ENST00000424037 437 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AC104837.2-201ENST00000427236 424 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AC068287.1-201ENST00000430283 295 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 GOT2P5-201ENST00000433995 546 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AC008072.1-201ENST00000434254 824 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AL627308.1-201ENST00000435693 821 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AL512326.1-201ENST00000443050 721 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 ARL2BPP10-201ENST00000446487 531 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC2.83□□□□□ -1.96
CKS1BP61024 RAB28P3-201ENST00000448325 597 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 RPL21P8-201ENST00000465083 535 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 RPL6P9-201ENST00000466502 859 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 RPL23AP12-201ENST00000467573 473 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 RPL30P11-201ENST00000495304 339 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
CKS1BP61024 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC2.83□□□□□ -1.96
CKS1BP61024 OR5M14P-201ENST00000506803 618 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 TMEM248P1-201ENST00000510579 951 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 ARL2BPP6-201ENST00000512757 439 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.83□□□□□ -1.96
CKS1BP61024 RN7SKP60-201ENST00000516985 239 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 RN7SKP234-201ENST00000517173 224 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AP001922.4-201ENST00000526967 290 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AP000827.1-201ENST00000527814 258 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC2.83□□□□□ -1.96
CKS1BP61024 OR5M2P-201ENST00000529003 936 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.83□□□□□ -1.96
CKS1BP61024 AC008147.3-201ENST00000548666 354 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC2.83□□□□□ -1.96
CKS1BP61024 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC2.83□□□□□ -1.96
CKS1BP61024 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC2.83□□□□□ -1.96
CKS1BP61024 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC2.83□□□□□ -1.96
CKS1BP61024 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC2.83□□□□□ -1.96
CKS1BP61024 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC2.83□□□□□ -1.96
CKS1BP61024 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC2.83□□□□□ -1.96
CKS1BP61024 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.83□□□□□ -1.96
CKS1BP61024 AP001160.4-201ENST00000596971 382 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AC006946.3-201ENST00000609791 756 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 PDCD6IPP1-202ENST00000622242 1064 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AC019080.5-201ENST00000624891 757 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC2.83□□□□□ -1.96
CKS1BP61024 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CKS1BP61024 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
CKS1BP61024 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.83□□□□□ -1.96
CKS1BP61024 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
CKS1BP61024 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CKS1BP61024 AC058791.1-201ENST00000608412 3198 ntBASIC2.82□□□□□ -1.96
CKS1BP61024 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CKS1BP61024 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.82□□□□□ -1.96
CKS1BP61024 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CKS1BP61024 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CKS1BP61024 RN7SKP280-201ENST00000364196 304 ntBASIC2.82□□□□□ -1.96
CKS1BP61024 SNORA7.2-201ENST00000364446 145 ntBASIC2.82□□□□□ -1.96
CKS1BP61024 SNORA70E-201ENST00000384492 135 ntBASIC2.82□□□□□ -1.96
CKS1BP61024 SAR1AP2-201ENST00000392696 594 ntBASIC2.82□□□□□ -1.96
CKS1BP61024 AC097374.1-203ENST00000400783 485 ntBASIC2.82□□□□□ -1.96
CKS1BP61024 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.82□□□□□ -1.96
CKS1BP61024 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.82□□□□□ -1.96
CKS1BP61024 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC2.82□□□□□ -1.96
CKS1BP61024 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2.82□□□□□ -1.96
CKS1BP61024 AC011742.1-201ENST00000431448 434 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms