Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXG1P55316 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.4□□□□□ -1.71
FOXG1P55316 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXG1P55316 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXG1P55316 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
FOXG1P55316 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FOXG1P55316 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FOXG1P55316 AC097461.1-201ENST00000568928 2821 ntBASIC4.4□□□□□ -1.71
FOXG1P55316 AL137100.1-201ENST00000556703 1620 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXG1P55316 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
FOXG1P55316 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXG1P55316 AC007342.7-201ENST00000624610 2337 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXG1P55316 AP000776.1-201ENST00000530032 1663 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXG1P55316 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.39□□□□□ -1.71
FOXG1P55316 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXG1P55316 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXG1P55316 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXG1P55316 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXG1P55316 AL391994.1-201ENST00000254724 282 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
FOXG1P55316 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXG1P55316 RNU4-21P-201ENST00000362802 126 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 RNU4-7P-201ENST00000364758 141 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 MIR137-201ENST00000385223 102 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC013442.1-201ENST00000397347 228 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 BTF3P7-201ENST00000407097 488 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC007899.1-201ENST00000412776 775 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.39□□□□□ -1.71
FOXG1P55316 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXG1P55316 RPL21P43-201ENST00000425440 472 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXG1P55316 HMGN2P27-201ENST00000427352 270 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXG1P55316 RPS29P9-201ENST00000440360 171 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 OR7E125P-201ENST00000443450 846 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXG1P55316 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXG1P55316 COX6CP2-201ENST00000444980 225 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXG1P55316 AC093392.2-201ENST00000450682 337 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXG1P55316 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXG1P55316 CBX1P2-201ENST00000453841 458 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXG1P55316 CCDC75P1-201ENST00000469247 791 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC011979.1-201ENST00000472300 483 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 RPL7AP10-201ENST00000481016 791 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 IGLV2-34-201ENST00000490007 283 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 RN7SL591P-201ENST00000496150 292 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 MTND2P33-201ENST00000506452 1031 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.39□□□□□ -1.71
FOXG1P55316 RNU6-718P-201ENST00000516166 105 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 RNA5SP392-201ENST00000516905 112 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.39□□□□□ -1.71
FOXG1P55316 AC008033.2-201ENST00000542626 177 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXG1P55316 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.39□□□□□ -1.71
FOXG1P55316 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXG1P55316 NDUFB4P11-201ENST00000560510 395 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXG1P55316 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXG1P55316 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXG1P55316 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXG1P55316 VN1R92P-201ENST00000598511 928 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXG1P55316 BNIP3P33-201ENST00000598912 569 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC083899.3-201ENST00000603413 594 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AL137072.1-201ENST00000603444 466 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 RNU4-89P-201ENST00000607443 133 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC004067.1-201ENST00000608733 700 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXG1P55316 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXG1P55316 RPL23AP61-201ENST00000623642 466 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AL353662.3-201ENST00000625131 237 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXG1P55316 OR5AK4P-201ENST00000635912 903 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
FOXG1P55316 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXG1P55316 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXG1P55316 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXG1P55316 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXG1P55316 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXG1P55316 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXG1P55316 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXG1P55316 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXG1P55316 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
FOXG1P55316 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
FOXG1P55316 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXG1P55316 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXG1P55316 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXG1P55316 TRIM51GP-201ENST00000534741 1350 ntBASIC4.39□□□□□ -1.71
FOXG1P55316 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXG1P55316 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXG1P55316 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
FOXG1P55316 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXG1P55316 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXG1P55316 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms