Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.35□□□□□ -1.71
CDH13P55290 HIGD1AP8-201ENST00000453927 274 ntBASIC4.35□□□□□ -1.71
CDH13P55290 TVP23BP2-201ENST00000455082 615 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AC104164.3-201ENST00000467363 1258 ntBASIC4.35□□□□□ -1.71
CDH13P55290 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH13P55290 AC011005.3-201ENST00000491624 395 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH13P55290 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH13P55290 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH13P55290 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH13P55290 RPL7L1P13-201ENST00000511702 739 ntBASIC4.35□□□□□ -1.71
CDH13P55290 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH13P55290 AC008694.2-201ENST00000517591 306 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AP001207.2-201ENST00000519490 539 ntBASIC4.35□□□□□ -1.71
CDH13P55290 HIGD1AP6-201ENST00000521833 279 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AF279873.1-201ENST00000523393 313 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AP000676.2-201ENST00000529711 301 ntBASIC4.35□□□□□ -1.71
CDH13P55290 BRD9P1-201ENST00000529855 560 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH13P55290 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH13P55290 AC069240.1-201ENST00000548774 375 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AC004217.3-201ENST00000551552 878 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AC074029.1-201ENST00000552531 1044 ntBASIC4.35□□□□□ -1.71
CDH13P55290 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH13P55290 AC011477.5-201ENST00000586571 259 ntBASIC4.35□□□□□ -1.71
CDH13P55290 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH13P55290 AP001542.2-201ENST00000593141 364 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.35□□□□□ -1.71
CDH13P55290 AC069304.3-201ENST00000603938 1084 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AC005084.1-201ENST00000605160 304 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AC112220.2-201ENST00000605513 533 ntBASIC4.35□□□□□ -1.71
CDH13P55290 Z98200.1-201ENST00000607298 470 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AC020634.1-201ENST00000608701 549 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AC015813.4-201ENST00000610469 179 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AL158196.1-201ENST00000616786 434 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDH13P55290 MIR6719-201ENST00000622428 87 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AC007546.2-201ENST00000623996 360 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AC006065.6-201ENST00000625201 545 ntBASIC4.35□□□□□ -1.71
CDH13P55290 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDH13P55290 AC105074.1-201ENST00000623380 3095 ntBASIC4.35□□□□□ -1.71
CDH13P55290 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CDH13P55290 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
CDH13P55290 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH13P55290 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH13P55290 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH13P55290 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH13P55290 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH13P55290 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH13P55290 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH13P55290 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH13P55290 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CDH13P55290 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH13P55290 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CDH13P55290 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH13P55290 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH13P55290 AL133243.3-201ENST00000617415 3004 ntBASIC4.34□□□□□ -1.71
CDH13P55290 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CDH13P55290 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CDH13P55290 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH13P55290 RNA5SP307-201ENST00000362863 116 ntBASIC4.34□□□□□ -1.71
CDH13P55290 RNU6-619P-201ENST00000365146 108 ntBASIC4.34□□□□□ -1.71
CDH13P55290 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
CDH13P55290 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH13P55290 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH13P55290 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CDH13P55290 ATP5F1P2-201ENST00000398143 760 ntBASIC4.34□□□□□ -1.71
CDH13P55290 RN7SKP106-201ENST00000410832 272 ntBASIC4.34□□□□□ -1.71
CDH13P55290 RN7SKP216-201ENST00000411050 312 ntBASIC4.34□□□□□ -1.71
CDH13P55290 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH13P55290 PRELID3BP11-201ENST00000414230 479 ntBASIC4.34□□□□□ -1.71
CDH13P55290 BTF3P8-201ENST00000414577 526 ntBASIC4.34□□□□□ -1.71
CDH13P55290 SFR1P2-201ENST00000421841 730 ntBASIC4.34□□□□□ -1.71
CDH13P55290 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH13P55290 RPS12P5-201ENST00000423449 371 ntBASIC4.34□□□□□ -1.71
CDH13P55290 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH13P55290 SKP1P3-201ENST00000429280 487 ntBASIC4.34□□□□□ -1.71
CDH13P55290 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH13P55290 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH13P55290 MTCYBP42-201ENST00000444653 1130 ntBASIC4.34□□□□□ -1.71
CDH13P55290 RPS27AP17-201ENST00000463344 455 ntBASIC4.34□□□□□ -1.71
CDH13P55290 AC010469.1-201ENST00000463864 576 ntBASIC4.34□□□□□ -1.71
CDH13P55290 RPL21P71-201ENST00000465598 459 ntBASIC4.34□□□□□ -1.71
CDH13P55290 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH13P55290 AC006967.1-201ENST00000467608 589 ntBASIC4.34□□□□□ -1.71
CDH13P55290 RPL12P20-201ENST00000475538 479 ntBASIC4.34□□□□□ -1.71
CDH13P55290 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH13P55290 PGBD4P4-201ENST00000509673 613 ntBASIC4.34□□□□□ -1.71
CDH13P55290 SNORA19.3-201ENST00000516165 130 ntBASIC4.34□□□□□ -1.71
CDH13P55290 snoZ278.1-201ENST00000517059 112 ntBASIC4.34□□□□□ -1.71
CDH13P55290 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH13P55290 AC091163.3-201ENST00000518269 1144 ntBASIC4.34□□□□□ -1.71
CDH13P55290 AP001922.4-201ENST00000526967 290 ntBASIC4.34□□□□□ -1.71
CDH13P55290 DEFB130C-202ENST00000530001 230 ntBASIC4.34□□□□□ -1.71
CDH13P55290 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.34□□□□□ -1.71
CDH13P55290 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH13P55290 AL121834.1-201ENST00000572284 509 ntBASIC4.34□□□□□ -1.71
CDH13P55290 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH13P55290 AC090312.1-201ENST00000580637 348 ntBASIC4.34□□□□□ -1.71
CDH13P55290 AC096947.1-201ENST00000603233 470 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms