Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH11P55287 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC107027.3-201ENST00000565095 3473 ntBASIC4.17□□□□□ -1.74
CDH11P55287 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH11P55287 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH11P55287 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CDH11P55287 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CDH11P55287 RNA5SP28-201ENST00000363841 119 ntBASIC4.17□□□□□ -1.74
CDH11P55287 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CDH11P55287 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
CDH11P55287 LAP3P1-201ENST00000403648 294 ntBASIC4.17□□□□□ -1.74
CDH11P55287 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH11P55287 AC069213.2-201ENST00000420238 366 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH11P55287 GAPDHP49-201ENST00000421421 961 ntBASIC4.17□□□□□ -1.74
CDH11P55287 EIF4EP1-201ENST00000422311 642 ntBASIC4.17□□□□□ -1.74
CDH11P55287 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH11P55287 XKRYP1-201ENST00000423438 492 ntBASIC4.17□□□□□ -1.74
CDH11P55287 IPMKP1-201ENST00000425988 855 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC092447.3-201ENST00000426027 686 ntBASIC4.17□□□□□ -1.74
CDH11P55287 OR5AW1P-201ENST00000426334 1006 ntBASIC4.17□□□□□ -1.74
CDH11P55287 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.17□□□□□ -1.74
CDH11P55287 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH11P55287 XKRYP2-201ENST00000432915 492 ntBASIC4.17□□□□□ -1.74
CDH11P55287 NANOGP2-201ENST00000435391 727 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC005154.2-201ENST00000438110 379 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC011753.3-201ENST00000443436 406 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC009220.1-201ENST00000451614 275 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC098826.2-201ENST00000452011 651 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.17□□□□□ -1.74
CDH11P55287 AL513533.1-201ENST00000453728 415 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC092155.2-201ENST00000454675 477 ntBASIC4.17□□□□□ -1.74
CDH11P55287 RPS5P7-201ENST00000456664 608 ntBASIC4.17□□□□□ -1.74
CDH11P55287 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CDH11P55287 PRDX3P4-201ENST00000470828 747 ntBASIC4.17□□□□□ -1.74
CDH11P55287 RN7SL860P-201ENST00000473738 223 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC091959.2-201ENST00000477363 321 ntBASIC4.17□□□□□ -1.74
CDH11P55287 RN7SL459P-201ENST00000481078 302 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC079203.1-201ENST00000487972 404 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH11P55287 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH11P55287 AC098862.1-201ENST00000504991 413 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH11P55287 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH11P55287 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.17□□□□□ -1.74
CDH11P55287 RN7SKP287-201ENST00000516546 266 ntBASIC4.17□□□□□ -1.74
CDH11P55287 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
CDH11P55287 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH11P55287 AC234772.3-201ENST00000602277 528 ntBASIC4.17□□□□□ -1.74
CDH11P55287 RPL26P30-202ENST00000602923 645 ntBASIC4.17□□□□□ -1.74
CDH11P55287 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
CDH11P55287 AC009948.4-201ENST00000604692 675 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC243654.2-201ENST00000612843 443 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AL353726.1-201ENST00000614041 1000 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AC079395.3-201ENST00000615161 484 ntBASIC4.17□□□□□ -1.74
CDH11P55287 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH11P55287 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CDH11P55287 AC016717.3-201ENST00000624730 554 ntBASIC4.17□□□□□ -1.74
CDH11P55287 ATE1-AS1-202ENST00000636460 506 ntBASIC4.17□□□□□ -1.74
CDH11P55287 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CDH11P55287 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH11P55287 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CDH11P55287 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CDH11P55287 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH11P55287 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH11P55287 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH11P55287 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH11P55287 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH11P55287 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CDH11P55287 AL450326.2-201ENST00000421913 1962 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AC138393.1-206ENST00000540997 1886 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AL442639.1-201ENST00000625030 1899 ntBASIC4.16□□□□□ -1.74
CDH11P55287 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH11P55287 AC010928.1-201ENST00000592477 1447 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AL590240.1-201ENST00000334118 313 ntBASIC4.16□□□□□ -1.74
CDH11P55287 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH11P55287 RNU1-108P-201ENST00000362556 161 ntBASIC4.16□□□□□ -1.74
CDH11P55287 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH11P55287 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH11P55287 RNU6-224P-201ENST00000384055 107 ntBASIC4.16□□□□□ -1.74
CDH11P55287 MIR141-201ENST00000384975 95 ntBASIC4.16□□□□□ -1.74
CDH11P55287 Y_RNA.578-201ENST00000390903 88 ntBASIC4.16□□□□□ -1.74
CDH11P55287 RNU6-1242P-201ENST00000391052 103 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AC136624.1-201ENST00000400791 413 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AL136310.1-201ENST00000404926 654 ntBASIC4.16□□□□□ -1.74
CDH11P55287 RNU6-575P-201ENST00000411326 105 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AL591848.1-201ENST00000413092 322 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH11P55287 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH11P55287 RPS3AP37-201ENST00000419176 745 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AC114814.2-201ENST00000419195 485 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AL513175.2-201ENST00000422071 443 ntBASIC4.16□□□□□ -1.74
CDH11P55287 DNAJC19P7-201ENST00000428811 344 ntBASIC4.16□□□□□ -1.74
CDH11P55287 DYNLL1P7-201ENST00000429273 258 ntBASIC4.16□□□□□ -1.74
CDH11P55287 RPL23AP25-201ENST00000430973 463 ntBASIC4.16□□□□□ -1.74
CDH11P55287 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CDH11P55287 AC016831.4-201ENST00000438302 307 ntBASIC4.16□□□□□ -1.74
CDH11P55287 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH11P55287 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH11P55287 YWHAQP9-201ENST00000445891 512 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms