Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.31□□□□□ -1.72
PDX1P52945 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDX1P52945 RNU6-353P-201ENST00000364266 108 ntBASIC4.31□□□□□ -1.72
PDX1P52945 RNU1-132P-201ENST00000364300 164 ntBASIC4.31□□□□□ -1.72
PDX1P52945 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDX1P52945 RPS26P8-201ENST00000393490 348 ntBASIC4.31□□□□□ -1.72
PDX1P52945 DNAJC19P6-201ENST00000401853 280 ntBASIC4.31□□□□□ -1.72
PDX1P52945 RNU6-584P-201ENST00000410350 95 ntBASIC4.31□□□□□ -1.72
PDX1P52945 AC092745.2-202ENST00000411880 369 ntBASIC4.31□□□□□ -1.72
PDX1P52945 AL139095.3-201ENST00000419672 1203 ntBASIC4.31□□□□□ -1.72
PDX1P52945 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.31□□□□□ -1.72
PDX1P52945 USP12PY-201ENST00000427677 1064 ntBASIC4.31□□□□□ -1.72
PDX1P52945 ELOCP10-201ENST00000440624 327 ntBASIC4.31□□□□□ -1.72
PDX1P52945 EEF1A1P1-201ENST00000447052 739 ntBASIC4.31□□□□□ -1.72
PDX1P52945 AC005002.1-201ENST00000447458 540 ntBASIC4.31□□□□□ -1.72
PDX1P52945 AC105137.1-201ENST00000484355 562 ntBASIC4.31□□□□□ -1.72
PDX1P52945 ARL4AP1-201ENST00000503220 705 ntBASIC4.31□□□□□ -1.72
PDX1P52945 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.31□□□□□ -1.72
PDX1P52945 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.31□□□□□ -1.72
PDX1P52945 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.31□□□□□ -1.72
PDX1P52945 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.31□□□□□ -1.72
PDX1P52945 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.31□□□□□ -1.72
PDX1P52945 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.31□□□□□ -1.72
PDX1P52945 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.31□□□□□ -1.72
PDX1P52945 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDX1P52945 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.31□□□□□ -1.72
PDX1P52945 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.31□□□□□ -1.72
PDX1P52945 RPAP2P1-201ENST00000603626 1168 ntBASIC4.31□□□□□ -1.72
PDX1P52945 ELOCP34-201ENST00000604436 327 ntBASIC4.31□□□□□ -1.72
PDX1P52945 AC090948.2-201ENST00000607363 564 ntBASIC4.31□□□□□ -1.72
PDX1P52945 AC017076.1-201ENST00000607613 578 ntBASIC4.31□□□□□ -1.72
PDX1P52945 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.31□□□□□ -1.72
PDX1P52945 AC005086.4-201ENST00000623065 213 ntBASIC4.31□□□□□ -1.72
PDX1P52945 AC104985.3-201ENST00000623479 597 ntBASIC4.31□□□□□ -1.72
PDX1P52945 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.31□□□□□ -1.72
PDX1P52945 EIF2AP4-201ENST00000424793 1781 ntBASIC4.31□□□□□ -1.72
PDX1P52945 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PDX1P52945 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDX1P52945 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.31□□□□□ -1.72
PDX1P52945 AC104118.1-201ENST00000607625 1589 ntBASIC4.31□□□□□ -1.72
PDX1P52945 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
PDX1P52945 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
PDX1P52945 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDX1P52945 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
PDX1P52945 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
PDX1P52945 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
PDX1P52945 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDX1P52945 AC096656.1-201ENST00000623826 1364 ntBASIC4.3□□□□□ -1.72
PDX1P52945 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDX1P52945 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDX1P52945 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.3□□□□□ -1.72
PDX1P52945 RPL32P23-201ENST00000397237 405 ntBASIC4.3□□□□□ -1.72
PDX1P52945 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.3□□□□□ -1.72
PDX1P52945 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.3□□□□□ -1.72
PDX1P52945 AL449283.1-202ENST00000418249 604 ntBASIC4.3□□□□□ -1.72
PDX1P52945 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.3□□□□□ -1.72
PDX1P52945 RPL21P43-201ENST00000425440 472 ntBASIC4.3□□□□□ -1.72
PDX1P52945 DYNLL1P7-201ENST00000429273 258 ntBASIC4.3□□□□□ -1.72
PDX1P52945 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.3□□□□□ -1.72
PDX1P52945 AL031663.1-201ENST00000437445 219 ntBASIC4.3□□□□□ -1.72
PDX1P52945 YWHAQP9-201ENST00000445891 512 ntBASIC4.3□□□□□ -1.72
PDX1P52945 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.3□□□□□ -1.72
PDX1P52945 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.3□□□□□ -1.72
PDX1P52945 MTND2P8-201ENST00000450555 1025 ntBASIC4.3□□□□□ -1.72
PDX1P52945 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.3□□□□□ -1.72
PDX1P52945 AC244505.3-201ENST00000454598 187 ntBASIC4.3□□□□□ -1.72
PDX1P52945 CDC42P1-201ENST00000456658 548 ntBASIC4.3□□□□□ -1.72
PDX1P52945 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.3□□□□□ -1.72
PDX1P52945 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.3□□□□□ -1.72
PDX1P52945 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.3□□□□□ -1.72
PDX1P52945 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.3□□□□□ -1.72
PDX1P52945 PRELID3BP4-201ENST00000515476 571 ntBASIC4.3□□□□□ -1.72
PDX1P52945 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.3□□□□□ -1.72
PDX1P52945 AC087897.1-201ENST00000550134 156 ntBASIC4.3□□□□□ -1.72
PDX1P52945 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.3□□□□□ -1.72
PDX1P52945 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.3□□□□□ -1.72
PDX1P52945 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.3□□□□□ -1.72
PDX1P52945 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.3□□□□□ -1.72
PDX1P52945 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.3□□□□□ -1.72
PDX1P52945 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.3□□□□□ -1.72
PDX1P52945 MTCO1P40-201ENST00000574371 625 ntBASIC4.3□□□□□ -1.72
PDX1P52945 RN7SL176P-201ENST00000580352 264 ntBASIC4.3□□□□□ -1.72
PDX1P52945 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.3□□□□□ -1.72
PDX1P52945 AC010200.2-201ENST00000605098 235 ntBASIC4.3□□□□□ -1.72
PDX1P52945 SNORD91B-202ENST00000608459 222 ntBASIC4.3□□□□□ -1.72
PDX1P52945 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.3□□□□□ -1.72
PDX1P52945 ATE1-AS1-202ENST00000636460 506 ntBASIC4.3□□□□□ -1.72
PDX1P52945 BX649567.1-201ENST00000642071 1134 ntBASIC4.3□□□□□ -1.72
PDX1P52945 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDX1P52945 AC073055.1-201ENST00000456901 1621 ntBASIC4.3□□□□□ -1.72
PDX1P52945 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDX1P52945 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDX1P52945 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDX1P52945 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.3□□□□□ -1.72
PDX1P52945 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDX1P52945 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
PDX1P52945 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.3□□□□□ -1.72
PDX1P52945 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDX1P52945 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDX1P52945 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms