Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 MTCO2P23-201ENST00000425216 680 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 HMGB3P5-201ENST00000428894 612 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCN3P51790 AL512326.1-201ENST00000443050 721 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLCN3P51790 AC114755.5-201ENST00000447760 831 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.76□□□□□ -1.65
CLCN3P51790 AL139824.2-201ENST00000458731 1095 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 AC104164.3-201ENST00000467363 1258 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 AC020898.1-201ENST00000474167 787 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.76□□□□□ -1.65
CLCN3P51790 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.76□□□□□ -1.65
CLCN3P51790 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCN3P51790 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.76□□□□□ -1.65
CLCN3P51790 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.76□□□□□ -1.65
CLCN3P51790 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCN3P51790 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.76□□□□□ -1.65
CLCN3P51790 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLCN3P51790 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.76□□□□□ -1.65
CLCN3P51790 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.76□□□□□ -1.65
CLCN3P51790 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.76□□□□□ -1.65
CLCN3P51790 AC027455.1-201ENST00000574104 594 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 MTATP6P24-201ENST00000576835 677 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 DPRXP4-201ENST00000578053 568 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 AC233702.9-201ENST00000581528 203 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCN3P51790 RNF138P2-201ENST00000603490 592 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 AL161729.3-201ENST00000603533 673 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 AL121652.1-201ENST00000608851 448 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCN3P51790 MIR8059-201ENST00000620427 81 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 AL590396.4-201ENST00000636779 956 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLCN3P51790 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLCN3P51790 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.76□□□□□ -1.65
CLCN3P51790 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCN3P51790 MTCO1P6-201ENST00000481192 1384 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 MAPK10-303ENST00000641324 3959 ntBASIC4.76□□□□□ -1.65
CLCN3P51790 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCN3P51790 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CLCN3P51790 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.75□□□□□ -1.65
CLCN3P51790 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLCN3P51790 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLCN3P51790 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CLCN3P51790 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.75□□□□□ -1.65
CLCN3P51790 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CLCN3P51790 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CLCN3P51790 AC091046.3-201ENST00000631455 1574 ntBASIC4.75□□□□□ -1.65
CLCN3P51790 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.75□□□□□ -1.65
CLCN3P51790 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCN3P51790 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
CLCN3P51790 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCN3P51790 RNU6-1339P-201ENST00000363574 91 ntBASIC4.75□□□□□ -1.65
CLCN3P51790 RNU1-13P-201ENST00000384499 162 ntBASIC4.75□□□□□ -1.65
CLCN3P51790 AL022722.2-201ENST00000402519 180 ntBASIC4.75□□□□□ -1.65
CLCN3P51790 RPL7P27-201ENST00000403775 720 ntBASIC4.75□□□□□ -1.65
CLCN3P51790 GSTM3P2-201ENST00000412746 530 ntBASIC4.75□□□□□ -1.65
CLCN3P51790 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCN3P51790 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.75□□□□□ -1.65
CLCN3P51790 BTF3P10-201ENST00000433415 495 ntBASIC4.75□□□□□ -1.65
CLCN3P51790 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.75□□□□□ -1.65
CLCN3P51790 AL031663.1-201ENST00000437445 219 ntBASIC4.75□□□□□ -1.65
CLCN3P51790 AL592437.1-201ENST00000443781 492 ntBASIC4.75□□□□□ -1.65
CLCN3P51790 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCN3P51790 AC002553.2-201ENST00000453217 340 ntBASIC4.75□□□□□ -1.65
CLCN3P51790 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCN3P51790 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCN3P51790 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCN3P51790 AC021451.1-201ENST00000523498 1129 ntBASIC4.75□□□□□ -1.65
CLCN3P51790 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.75□□□□□ -1.65
CLCN3P51790 AC084824.1-201ENST00000550917 1005 ntBASIC4.75□□□□□ -1.65
CLCN3P51790 AL352979.3-201ENST00000553515 247 ntBASIC4.75□□□□□ -1.65
CLCN3P51790 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCN3P51790 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLCN3P51790 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.75□□□□□ -1.65
CLCN3P51790 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.75□□□□□ -1.65
CLCN3P51790 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLCN3P51790 AC015726.3-201ENST00000624501 418 ntBASIC4.75□□□□□ -1.65
CLCN3P51790 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.75□□□□□ -1.65
CLCN3P51790 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.75□□□□□ -1.65
CLCN3P51790 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCN3P51790 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.75□□□□□ -1.65
CLCN3P51790 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CLCN3P51790 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCN3P51790 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCN3P51790 MAPK10-286ENST00000641208 8747 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCN3P51790 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLCN3P51790 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.74□□□□□ -1.65
CLCN3P51790 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCN3P51790 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CLCN3P51790 RNU1-94P-201ENST00000362627 173 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLCN3P51790 RNU1-44P-201ENST00000384453 163 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCN3P51790 ZNF602P-201ENST00000405929 924 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 MIR1911-201ENST00000410783 80 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 RN7SKP263-201ENST00000411194 309 ntBASIC4.74□□□□□ -1.65
CLCN3P51790 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms