Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AP001273.1-201ENST00000624493 3152 ntBASIC3.76□□□□□ -1.81
HCFC1P51610 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HCFC1P51610 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HCFC1P51610 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HCFC1P51610 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.76□□□□□ -1.81
HCFC1P51610 AC000123.3-201ENST00000624029 4975 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.75□□□□□ -1.81
HCFC1P51610 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HCFC1P51610 AC106754.1-201ENST00000562632 1513 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
HCFC1P51610 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
HCFC1P51610 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HCFC1P51610 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HCFC1P51610 MTCO2P8-201ENST00000412213 658 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AL034379.1-201ENST00000423216 253 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 DEFB130D-201ENST00000426866 237 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AL117339.2-201ENST00000430475 180 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.75□□□□□ -1.81
HCFC1P51610 ARAFP2-201ENST00000440565 559 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.75□□□□□ -1.81
HCFC1P51610 HSFY3P-201ENST00000444242 1191 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC3.75□□□□□ -1.81
HCFC1P51610 AL162151.2-201ENST00000448875 158 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AF213884.1-201ENST00000488102 463 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.75□□□□□ -1.81
HCFC1P51610 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.75□□□□□ -1.81
HCFC1P51610 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.75□□□□□ -1.81
HCFC1P51610 Y_RNA.717-201ENST00000517106 92 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 TRMT10BP1-201ENST00000519377 943 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AP000859.1-201ENST00000525536 307 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 OR7E13P-201ENST00000526052 910 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.75□□□□□ -1.81
HCFC1P51610 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.75□□□□□ -1.81
HCFC1P51610 DPRXP4-201ENST00000578053 568 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AP000919.1-202ENST00000581139 1264 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 FAM106CP-201ENST00000582212 507 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AC008507.2-201ENST00000588402 1176 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AL161756.2-201ENST00000604597 246 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.75□□□□□ -1.81
HCFC1P51610 FAM27D1-201ENST00000612308 341 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.75□□□□□ -1.81
HCFC1P51610 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.75□□□□□ -1.81
HCFC1P51610 MIR3653-201ENST00000625572 110 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HCFC1P51610 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.75□□□□□ -1.81
HCFC1P51610 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
HCFC1P51610 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.75□□□□□ -1.81
HCFC1P51610 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HCFC1P51610 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HCFC1P51610 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HCFC1P51610 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
HCFC1P51610 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HCFC1P51610 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.75□□□□□ -1.81
HCFC1P51610 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
HCFC1P51610 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HCFC1P51610 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HCFC1P51610 RNA5SP119-201ENST00000362715 117 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 RNU5B-4P-201ENST00000363508 111 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HCFC1P51610 RNU6-207P-201ENST00000384137 107 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.75□□□□□ -1.81
HCFC1P51610 TATDN1P1-201ENST00000414123 891 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 MTCYBP7-201ENST00000419540 1134 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HCFC1P51610 FO393414.1-201ENST00000428697 1184 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 MTND2P2-201ENST00000434633 945 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 RPL23AP83-201ENST00000434984 473 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 ARF4P4-201ENST00000439608 520 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.75□□□□□ -1.81
HCFC1P51610 AL358232.1-201ENST00000448030 501 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.75□□□□□ -1.81
HCFC1P51610 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.75□□□□□ -1.81
HCFC1P51610 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HCFC1P51610 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.75□□□□□ -1.81
HCFC1P51610 AC021146.3-201ENST00000511911 260 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.75□□□□□ -1.81
HCFC1P51610 RN7SKP265-201ENST00000516448 223 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 RNU6-1308P-201ENST00000516817 103 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.75□□□□□ -1.81
HCFC1P51610 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.75□□□□□ -1.81
HCFC1P51610 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.75□□□□□ -1.81
HCFC1P51610 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
HCFC1P51610 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.75□□□□□ -1.81
HCFC1P51610 AC107982.3-201ENST00000584957 985 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 SNX6P1-201ENST00000601728 1224 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 AP002802.2-201ENST00000605877 235 ntBASIC3.75□□□□□ -1.81
HCFC1P51610 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.75□□□□□ -1.81
HCFC1P51610 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
HCFC1P51610 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HCFC1P51610 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HCFC1P51610 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
HCFC1P51610 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
HCFC1P51610 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HCFC1P51610 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HCFC1P51610 EOGT-210ENST00000615922 1931 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HCFC1P51610 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.74□□□□□ -1.81
HCFC1P51610 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HCFC1P51610 RNA5SP151-201ENST00000365632 117 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 AL672167.2-201ENST00000377164 879 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms